SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): trichome

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   plant anatomical entity [PO:0025131] <3>
+ + 2:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ 1:   epidermis [PO:0005679] <12>(334|497) (335|211|73)
+ 1:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
0:   trichome [PO:0000282] <7>(7|9) (8|4|0)
- 1:   phyllome trichome [PO:0025186] <7>(4|4) (4|2|0)
- 1:   multicellular trichome [PO:0025162] <5>(0|0) (0|0|0)
- 1:   shoot axis trichome [PO:0005003] <3>(0|0) (0|0|0)
- 1:   trichome apex [PO:0025550] <2>(0|0) (0|0|0)
- 1:   glandular trichome [PO:0004509](0|0) (0|0|0)
- 1:   seed trichome [PO:0004511](0|0) (0|0|0)
- 1:   unicellular trichome [PO:0025537](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.00000000002195Direct
Cupredoxins0.0000000001917Direct
Band 7/SPFH domain0.00000006757Direct
Homeodomain-like0.000001882Direct
Bet v1-like0.000187Direct
Thiolase-like0.002514Inherited
RING/U-box0.005743Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Multidomain cupredoxins0.0000000000002394Direct
Galactosyltransferase LgtC0.000000007315Direct
RING finger domain, C3HC40.00008578Direct
Actin/HSP700.0002303Direct
CheY-related0.0003113Direct
Homeodomain0.000415Direct
Chalcone synthase-like0.0007683Direct
GARP response regulators0.0009495Direct
Myb/SANT domain0.004065Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.00000000001695Direct
Cupredoxins0.0000000001481Direct
Band 7/SPFH domain0.00000005236Direct
Homeodomain-like0.000001463Direct
Bet v1-like0.0001469Direct
Actin-like ATPase domain0.0009049Direct
Thiolase-like0.002005Inherited
RING/U-box0.004615Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49503,49503
  • 49503 - Cupredoxins
  • 49503 - Cupredoxins
  • 0.0000000000001068Direct
    55961,55961
  • 55961 - Bet v1-like
  • 55961 - Bet v1-like
  • 0.000000003771Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0005006Direct
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.001421Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)