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Plant structure DEvelopment stage (PDE): L mature pollen stage

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   reproductive shoot system development stage [PO:0025530] <2>(450|628) (449|297|94)
+ + + + + 5:   flower development stage [PO:0007615] <3>(429|604) (429|285|92)
+ + + + + 5:   plant structure development stage [PO:0009012] <7>
+ + + + + 5:   shoot system development stage [PO:0025527] <4>(460|639) (459|300|95)
+ + + + 4:   floral organ formation stage [PO:0025585] <3>(407|580) (407|271|89)
+ + + + 4:   collective plant organ structure development stage [PO:0025338] <2>(463|641) (462|300|95)
+ + + + 4:   plant organ development stage [PO:0025339] <3>(419|594) (419|276|90)
+ + + 3:   collective phyllome structure development stage [PO:0025578] <4>(407|580) (407|271|89)
+ + + 3:   floral organ differentiation stage [PO:0007600] <7>(407|580) (407|271|89)
+ + 2:   androecium development stage [PO:0007605] <3>(37|36) (38|14|1)
+ 1:   pollen development stage [PO:0001007] <13>(37|36) (38|14|1)
0:   L mature pollen stage [PO:0001016](15|17) (15|8|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Expressed protein At2g23090/F21P24.150Direct
S-adenosylmethionine synthetase0Direct
Heme-dependent catalase-like0Direct
F1F0 ATP synthase subunit C0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
Preprotein translocase SecE subunit0Direct
AN1-like Zinc finger0.0000008582Direct
ArfGap/RecO-like zinc finger0.00003079Direct
Cystatin/monellin0.00003592Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.00007748Direct
Acyl-CoA dehydrogenase NM domain-like0.00007748Direct
(Phosphotyrosine protein) phosphatases II0.0001031Direct
eIF1-like0.0003457Direct
SufE/NifU0.0003457Direct
Sec7 domain0.0004948Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
MioX-like0Direct
Cytidylyltransferase0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
Eps15 homology domain (EH domain)0Direct
RhoGDI-like0Direct
Ribosomal protein L10e0Direct
F1F0 ATP synthase subunit C0Direct
Preprotein translocase SecE subunit0Direct
NifU/IscU domain0Direct
S-adenosylmethionine synthetase0Direct
Heme-dependent catalases0Direct
AN1-like Zinc finger0.0000009026Direct
MutT-like0.00003142Direct
Pyk2-associated protein beta ARF-GAP domain0.00003306Direct
LIM domain0.0003341Direct
eIF1-like0.0003341Direct
Sec7 domain0.0004865Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Preprotein translocase SecE subunit0Direct
Heme-dependent catalase-like0Direct
S-adenosylmethionine synthetase0Direct
Expressed protein At2g23090/F21P24.150Direct
F1F0 ATP synthase subunit C0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
AN1-like Zinc finger0.0000007223Direct
ArfGap/RecO-like zinc finger0.00002593Direct
Cystatin/monellin0.00003026Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0000653Direct
Acyl-CoA dehydrogenase NM domain-like0.0000653Direct
(Phosphotyrosine protein) phosphatases II0.00008688Direct
eIF1-like0.0002923Direct
SufE/NifU0.0002923Direct
Sec7 domain0.0004183Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
  • 0Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    50729,55961
  • 50729 - PH domain-like
  • 55961 - Bet v1-like
  • 0Direct
    48403,57850
  • 48403 - Ankyrin repeat
  • 57850 - RING/U-box
  • 0Direct
    100966,75689
  • 100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
  • 75689 - Zinc-binding domain of translation initiation factor 2 beta
  • 0Direct
    57716,118310
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 118310 - AN1-like Zinc finger
  • 0.00001456Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.0000653Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)