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Plant ANatomical entity (PAN): chlorenchyma

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   plant anatomical entity [PO:0025131] <3>
+ + + + 4:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + 3:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + 2:   portion of ground tissue [PO:0025059] <28>(19|21) (19|7|2)
+ 1:   parenchyma [PO:0005421] <14>(11|13) (11|3|0)
0:   chlorenchyma [PO:0005426] <4>(8|8) (8|3|0)
- 1:   mesophyll [PO:0006070] <6>(8|7) (8|2|0)
- 1:   chlorenchyma cell [PO:0000076] <4>(4|3) (4|1|0)
- 1:   protonema [PO:0030003] <4>(0|0) (0|0|0)
- 1:   middle layer of ovary wall [PO:0005025](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein0Direct
Trimeric LpxA-like enzymes0.0000000002184Direct
EF-hand0.01031Inherited
Calcium ATPase, transmembrane domain M0.04154Inherited
Calcium ATPase, transduction domain A0.04154Inherited
HAD-like0.04154Inherited
Nucleotide-diphospho-sugar transferases0.0742Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein6.208e-16Direct
glucose-1-phosphate thymidylyltransferase0.000000000000007448Direct
GlmU C-terminal domain-like0.00000000000005119Direct
U-box0.000188Direct
Calcium ATPase, transmembrane domain M0.04029Inherited
Calcium ATPase, transduction domain A0.04029Inherited
Meta-cation ATPase, catalytic domain P0.04029Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Chlorophyll a-b binding protein0Direct
RuBisCO, small subunit0Direct
Trimeric LpxA-like enzymes0.0000000001688Direct
EF-hand0.008352Inherited
Calcium ATPase, transduction domain A0.03477Inherited
HAD-like0.03477Inherited
Calcium ATPase, transmembrane domain M0.03477Inherited
Nucleotide-diphospho-sugar transferases0.06333Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53448,51161
  • 53448 - Nucleotide-diphospho-sugar transferases
  • 51161 - Trimeric LpxA-like enzymes
  • 0.00000000000009026Direct
    57850,48371
  • 57850 - RING/U-box
  • 48371 - ARM repeat
  • 0.0000186Direct
    56784,81665
  • 56784 - HAD-like
  • 81665 - Calcium ATPase, transmembrane domain M
  • 0.03477Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)