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Plant ANatomical entity (PAN): leaf mesophyll

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   plant anatomical entity [PO:0025131] <3>
+ + + + + 5:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + + + 5:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + + 5:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + + + 4:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + + + 4:   portion of ground tissue [PO:0025059] <28>(19|21) (19|7|2)
+ + + + 4:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + 3:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + + 3:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + + 3:   parenchyma [PO:0005421] <14>(11|13) (11|3|0)
+ + 2:   chlorenchyma [PO:0005426] <4>(8|8) (8|3|0)
+ + 2:   phyllome [PO:0006001] <21>(245|378) (249|183|65)
+ 1:   leaf [PO:0025034] <12>(184|297) (186|141|53)
+ 1:   mesophyll [PO:0006070] <6>(8|7) (8|2|0)
0:   leaf mesophyll [PO:0005645] <4>(4|4) (4|1|0)
- 1:   leaf mesophyll intercellular space [PO:0025380] <2>(0|0) (0|0|0)
- 1:   palisade mesophyll [PO:0005648] <2>(0|0) (0|0|0)
- 1:   spongy mesophyll [PO:0005647] <2>(0|0) (0|0|0)
- 1:   leaf substomatal cavity [PO:0025399](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein0Direct
Trimeric LpxA-like enzymes0.00000000002109Direct
Nucleotide-diphospho-sugar transferases0.000001179Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein0Direct
glucose-1-phosphate thymidylyltransferase0.000000000000002483Direct
GlmU C-terminal domain-like0.00000000000001676Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Chlorophyll a-b binding protein0Direct
RuBisCO, small subunit0Direct
Trimeric LpxA-like enzymes0.00000000001628Direct
Nucleotide-diphospho-sugar transferases0.0000009161Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53448,51161
  • 53448 - Nucleotide-diphospho-sugar transferases
  • 51161 - Trimeric LpxA-like enzymes
  • 0.00000000000002511Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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