SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): root epidermis

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + 2:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ 1:   root system [PO:0025025] <3>(172|277) (175|127|50)
+ 1:   epidermis [PO:0005679] <12>(334|497) (335|211|73)
0:   root epidermis [PO:0006036] <3>(12|9) (12|2|0)
- 1:   root epidermal cell [PO:0025164] <3>(11|8) (11|2|0)
- 1:   adventitious root epidermis [PO:0006039](0|0) (0|0|0)
- 1:   velamen [PO:0006042](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Ammonium transporter0.000004706Direct
Cysteine-rich domain0.000007818Direct
HLH, helix-loop-helix DNA-binding domain0.00003565Direct
Cullin repeat-like0.00007253Direct
SAICAR synthase-like0.0006204Direct
Aquaporin-like0.0008513Direct
PR-1-like0.001053Inherited
Concanavalin A-like lectins/glucanases0.001726Inherited
Heme-dependent peroxidases0.004211Inherited
DNase I-like0.005743Inherited
Adenine nucleotide alpha hydrolases-like0.01221Inherited
Homeodomain-like0.046Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Glycosyl hydrolases family 160.0000001192Direct
Ammonium transporter0.000004109Direct
Exocyst complex component0.000009185Direct
HLH, helix-loop-helix DNA-binding domain0.00003479Direct
Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta0.0002418Direct
Inositol polyphosphate 5-phosphatase (IPP5)0.0003247Direct
PR-1-like0.0007641Direct
Aquaporin-like0.0007747Direct
CCP-like0.003429Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ammonium transporter0.000003663Direct
Cysteine-rich domain0.000006089Direct
HLH, helix-loop-helix DNA-binding domain0.00002786Direct
Cullin repeat-like0.00005676Direct
SAICAR synthase-like0.0004903Direct
Aquaporin-like0.0006738Direct
PR-1-like0.000834Direct
Concanavalin A-like lectins/glucanases0.001373Inherited
Heme-dependent peroxidases0.003375Inherited
DNase I-like0.004615Inherited
Adenine nucleotide alpha hydrolases-like0.009922Inherited
Homeodomain-like0.0386Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.00003685Direct
    101148,51126
  • 101148 - Plant invertase/pectin methylesterase inhibitor
  • 51126 - Pectin lyase-like
  • 0.001585Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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