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Plant ANatomical entity (PAN): portion of vascular tissue

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   plant anatomical entity [PO:0025131] <3>
+ + 2:   whole plant [PO:0000003] <7>(223|355) (227|170|61)
+ + 2:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ 1:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ 1:   vascular system [PO:0000034] <15>(25|31) (26|11|2)
0:   portion of vascular tissue [PO:0009015] <5>(15|18) (16|7|2)
- 1:   phloem [PO:0005417] <7>(4|5) (4|2|0)
- 1:   xylem [PO:0005352] <6>(3|3) (3|0|0)
- 1:   vascular bundle [PO:0005020] <3>(4|4) (4|3|2)
- 1:   secondary vascular tissue [PO:0025409] <2>(0|0) (0|0|0)
- 1:   primary vascular tissue [PO:0025408](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.000000000007852Direct
Homeodomain-like0.000000004857Direct
NAC domain0.00000003168Direct
Trimeric LpxA-like enzymes0.000001308Direct
RuBisCO, small subunit0.000001433Direct
GroES-like0.00001714Direct
MFS general substrate transporter0.0002057Direct
Aquaporin-like0.0003175Direct
Tubulin C-terminal domain-like0.0003934Direct
GST C-terminal domain-like0.0004909Direct
Tubulin nucleotide-binding domain-like0.0006374Direct
Formate/glycerate dehydrogenase catalytic domain-like0.0008212Direct
ABC transporter transmembrane region0.03432Inherited
Mitochondrial carrier0.04557Inherited
Thioredoxin-like0.1448Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Adenosine-5'phosphosulfate kinase (APS kinase)0Direct
Galactosyltransferase LgtC0.0000000000005661Direct
GlmU C-terminal domain-like0.00000000003571Direct
glucose-1-phosphate thymidylyltransferase0.000000001282Direct
NAC domain0.00000008701Direct
Alcohol dehydrogenase-like, N-terminal domain0.000007306Direct
Alcohol dehydrogenase-like, C-terminal domain0.000009317Direct
Myb/SANT domain0.0000103Direct
Homeodomain0.0001631Direct
Aquaporin-like0.0004301Direct
Tubulin, C-terminal domain0.000493Direct
Formate/glycerate dehydrogenases, NAD-domain0.0006706Direct
Tubulin, GTPase domain0.0007972Direct
Glutathione S-transferase (GST), N-terminal domain0.0008225Direct
Glutathione S-transferase (GST), C-terminal domain0.001068Inherited
GARP response regulators0.004437Inherited
ABC transporter transmembrane region0.02934Inherited
Mitochondrial carrier0.05198Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.000000000006062Direct
Homeodomain-like0.000000003757Direct
NAC domain0.00000002453Direct
Trimeric LpxA-like enzymes0.000001017Direct
RuBisCO, small subunit0.000001114Direct
GroES-like0.00001337Direct
MFS general substrate transporter0.0001617Direct
Aquaporin-like0.0002499Direct
Tubulin C-terminal domain-like0.0003101Direct
GST C-terminal domain-like0.0003874Direct
Tubulin nucleotide-binding domain-like0.0005038Direct
Formate/glycerate dehydrogenase catalytic domain-like0.0006498Direct
Mannose-binding lectins0.0009166Direct
ABC transporter transmembrane region0.02856Inherited
Mitochondrial carrier0.03822Inherited
Thioredoxin-like0.1282Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53448,51161
  • 53448 - Nucleotide-diphospho-sugar transferases
  • 51161 - Trimeric LpxA-like enzymes
  • 0.0000000001378Direct
    50129,51735
  • 50129 - GroES-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0.000004423Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.00014Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0003101Direct
    52283,51735
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0.0004601Direct
    52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.005529Inherited
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.02591Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.004739Inherited
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.004739Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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