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Plant ANatomical entity (PAN): shoot apical meristem

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   plant anatomical entity [PO:0025131] <3>
+ + + + + 5:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + + 4:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + + + 4:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + + 4:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + 3:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ + + 3:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + + 3:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + 2:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + 2:   shoot axis [PO:0025029] <25>(198|318) (199|150|55)
+ + 2:   portion of meristem tissue [PO:0009013] <23>(122|205) (124|96|39)
+ 1:   shoot meristem [PO:0006079] <3>(7|8) (8|6|1)
+ 1:   shoot apex [PO:0000037] <6>(161|263) (162|124|46)
+ 1:   apical meristem [PO:0020144] <2>(9|7) (10|5|1)
0:   shoot apical meristem [PO:0020148] <9>(7|6) (8|5|1)
- 1:   reproductive shoot apical meristem [PO:0008028] <2>(3|2) (3|1|0)
- 1:   shoot axis procambium [PO:0025260] <2>(0|0) (0|0|0)
- 1:   vegetative shoot apical meristem [PO:0008016] <2>(0|0) (0|0|0)
- 1:   peripheral zone [PO:0000225] <1>(0|0) (0|0|0)
- 1:   central zone [PO:0000224](0|0) (0|0|0)
- 1:   meristem L1 [PO:0009020](0|0) (0|0|0)
- 1:   meristem L2 [PO:0009021](0|0) (0|0|0)
- 1:   meristem L3 [PO:0009022](0|0) (0|0|0)
- 1:   rib zone [PO:0000226](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000000000009716Direct
TAZ domain0.000000001216Direct
Bet v1-like0.000000003202Direct
FYVE/PHD zinc finger0.000005488Direct
CheY-like0.00001895Direct
Skp1 dimerisation domain-like0.0001984Direct
Histone-fold0.0005886Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0Direct
TAZ domain0.00000000128Direct
PHD domain0.000002548Direct
ZZ domain0.000006111Direct
Nucleosome core histones0.00002938Direct
Chalcone synthase-like0.000458Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000000000007501Direct
TAZ domain0.0000000009399Direct
Bet v1-like0.000000002477Direct
FYVE/PHD zinc finger0.000004271Direct
CheY-like0.00001479Direct
Skp1 dimerisation domain-like0.0001559Direct
Histone-fold0.000465Direct
POZ domain0.0009757Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct
    55961,55961
  • 55961 - Bet v1-like
  • 55961 - Bet v1-like
  • 0.000000001453Direct
    57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 0.0000007733Direct
    52047,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.00002967Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0001559Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57850,57850,57933
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)