SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Plant ANatomical entity (PAN): shoot axis stele

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   plant anatomical entity [PO:0025131] <3>
+ + + + 4:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + + 4:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + + 4:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + 3:   cardinal part of multi-tissue plant structure [PO:0025498] <8>(185|291) (186|132|50)
+ + + 3:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + + 3:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + 2:   cardinal organ part [PO:0025001] <61>(182|290) (183|132|50)
+ + 2:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + 2:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ 1:   shoot axis [PO:0025029] <25>(198|318) (199|150|55)
+ 1:   stele [PO:0025197] <2>(10|9) (10|1|0)
0:   shoot axis stele [PO:0025198] <3>(4|3) (4|1|0)
- 1:   shoot axis vascular system [PO:0000039] <1>(3|2) (3|1|0)
- 1:   branch stele [PO:0025199](0|0) (0|0|0)
- 1:   stem stele [PO:0025200](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Chlorophyll a-b binding protein0.0000000000002502Direct
RuBisCO, small subunit0.000000000666Direct
Transducin (alpha subunit), insertion domain0.000000000666Direct
NAC domain0.0000008702Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Chlorophyll a-b binding protein0.000000000002053Direct
Transducin (alpha subunit), insertion domain0.0000000006282Direct
NAC domain0.0000009117Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Chlorophyll a-b binding protein0.0000000000001932Direct
RuBisCO, small subunit0.0000000005148Direct
Transducin (alpha subunit), insertion domain0.0000000005148Direct
NAC domain0.0000006758Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000000005148Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)