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Disease Ontology (DO): primary bacterial infectious disease

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   disease [DOID:4] <8>
+ + 2:   disease by infectious agent [DOID:0050117] <4>(37|50) (40|21|10)
+ 1:   bacterial infectious disease [DOID:104] <3>(14|21) (17|7|1)
0:   primary bacterial infectious disease [DOID:0050338] <44>(11|20) (14|7|1)
- 1:   spotted fever [DOID:11104] <14>(0|0) (0|0|0)
- 1:   tularemia [DOID:2123] <6>(0|0) (0|0|0)
- 1:   syphilis [DOID:4166] <5>(0|0) (0|0|0)
- 1:   bartonellosis [DOID:11102] <4>(0|0) (0|0|0)
- 1:   botulism [DOID:11976] <4>(0|0) (0|0|0)
- 1:   brucellosis [DOID:11077] <4>(1|2) (1|1|0)
- 1:   leprosy [DOID:1024] <4>(1|1) (1|0|0)
- 1:   tuberculosis [DOID:399] <4>(2|4) (3|2|0)
- 1:   anthrax disease [DOID:7427] <3>(0|0) (0|0|0)
- 1:   plague [DOID:3482] <3>(0|0) (0|0|0)
- 1:   typhus [DOID:11256] <3>(0|0) (0|0|0)
- 1:   ehrlichiosis [DOID:10242] <2>(0|0) (0|0|0)
- 1:   legionellosis [DOID:10458] <2>(0|0) (0|0|0)
- 1:   relapsing fever [DOID:13034] <2>(0|0) (0|0|0)
- 1:   yaws [DOID:10371] <2>(0|0) (0|0|0)
- 1:   tetanus [DOID:11338] <1>(0|0) (0|0|0)
- 1:   Buruli ulcer disease [DOID:0050456](0|0) (0|0|0)
- 1:   Haverhill fever [DOID:13238](0|0) (0|0|0)
- 1:   Lyme disease [DOID:11729](0|0) (0|0|0)
- 1:   Mycobacterium avium complex disease [DOID:2755](0|0) (0|0|0)
- 1:   Q fever [DOID:11100](0|0) (0|0|0)
- 1:   bejel [DOID:13431](0|0) (0|0|0)
- 1:   campylobacteriosis [DOID:13622](0|0) (0|0|0)
- 1:   chancroid [DOID:13778](0|0) (0|0|0)
- 1:   cholera [DOID:1498](0|0) (0|0|0)
- 1:   diphtheria [DOID:11405](0|0) (0|0|0)
- 1:   erysipeloid [DOID:0050061](0|0) (0|0|0)
- 1:   glanders [DOID:13444](0|0) (0|0|0)
- 1:   gonorrhea [DOID:7551](0|0) (0|0|0)
- 1:   granuloma inguinale [DOID:9113](0|0) (0|0|0)
- 1:   leptospirosis [DOID:2297](0|0) (0|0|0)
- 1:   listeriosis [DOID:11573](0|0) (0|0|0)
- 1:   melioidosis [DOID:5052](0|0) (0|0|0)
- 1:   ornithosis [DOID:11262](0|0) (0|0|0)
- 1:   paratyphoid fever [DOID:3055](0|0) (0|0|0)
- 1:   pasteurellosis [DOID:11055](0|0) (0|0|0)
- 1:   pinta disease [DOID:1022](0|0) (0|0|0)
- 1:   rhinoscleroma [DOID:11336](0|0) (0|0|0)
- 1:   salmonellosis [DOID:0060859](0|0) (0|0|0)
- 1:   sennetsu fever [DOID:0050485](0|0) (0|0|0)
- 1:   shigellosis [DOID:12385](0|0) (0|0|0)
- 1:   sodoku disease [DOID:12096](0|0) (0|0|0)
- 1:   staphyloenterotoxemia [DOID:96](0|0) (0|0|0)
- 1:   typhoid fever [DOID:13258](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Interleukin 8-like chemokines0.00000002198Direct
Defensin-like0.00004173Direct
MHC antigen-recognition domain0.00008117Direct
Triple coiled coil domain of C-type lectins0.0001043Direct
PGBD-like0.0001872Direct
Hemopexin-like domain0.0006049Direct
Toll/Interleukin receptor TIR domain0.0006049Direct
Heme-dependent peroxidases0.0009032Direct
SOCS box-like0.002102Inherited
ABC transporter transmembrane region0.007035Inherited
Fibronectin type III0.7034Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Interleukin 8-like chemokines0.00000002565Direct
Defensin0.00003468Direct
Interleukin-1 (IL-1)0.00003468Direct
MHC antigen-recognition domain0.00007774Direct
C1 set domains (antibody constant domain-like)0.00007774Direct
Triple coiled coil domain of C-type lectins0.00008236Direct
MMP N-terminal domain0.000163Direct
Pyrin domain, PYD0.0002015Direct
C-type lectin domain0.000401Direct
Toll/Interleukin receptor TIR domain0.0004022Direct
Matrix metalloproteases, catalytic domain0.0004022Direct
Short-chain cytokines0.0004504Direct
Hemopexin-like domain0.0005252Direct
Interferons/interleukin-10 (IL-10)0.0006414Direct
Myeloperoxidase-like0.0007202Direct
SOCS box-like0.001719Inherited
ABC transporter transmembrane region0.003016Inherited
Bcl-2 inhibitors of programmed cell death0.003307Inherited
ABC transporter ATPase domain-like0.05048Inherited
Fibronectin type III0.6547Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Interleukin 8-like chemokines0.00000001048Direct
Defensin-like0.00002394Direct
MHC antigen-recognition domain0.00004748Direct
Triple coiled coil domain of C-type lectins0.00006126Direct
PGBD-like0.0001117Direct
Toll/Interleukin receptor TIR domain0.0003705Direct
Hemopexin-like domain0.0003705Direct
Heme-dependent peroxidases0.0005651Direct
Immunoglobulin0.0008137Direct
RNI-like0.0009379Direct
SOCS box-like0.001375Inherited
Bcl-2 inhibitors of programmed cell death0.002674Inherited
ABC transporter transmembrane region0.004852Inherited
Fibronectin type III0.632Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.00002138Direct
    57944,56436
  • 57944 - Triple coiled coil domain of C-type lectins
  • 56436 - C-type lectin-like
  • 0.00006126Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.0001117Direct
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.000316Direct
    55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.000316Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.0008907Direct
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.004852Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.0004742Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)