SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): mature T-cell and NK-cell lymphoma

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   disease [DOID:4] <8>
+ + + + + + + 7:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ + + + + + 6:   cancer [DOID:162] <2>(115|181) (120|113|54)
+ + + + + 5:   organ system cancer [DOID:0050686] <14>(66|106) (72|58|31)
+ + + + 4:   immune system cancer [DOID:0060083] <3>(31|42) (33|27|13)
+ + + 3:   hematologic cancer [DOID:2531] <7>(30|42) (32|25|13)
+ + 2:   lymphoma [DOID:0060058] <7>(8|7) (9|1|1)
+ 1:   non-Hodgkin lymphoma [DOID:0060060] <4>(6|5) (6|0|0)
0:   mature T-cell and NK-cell lymphoma [DOID:0050743] <1>(4|4) (4|0|0)
- 1:   peripheral T-cell lymphoma [DOID:0050749] <1>(3|2) (3|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Defensin-like0.000008786Direct
Toll/Interleukin receptor TIR domain0.0003848Direct
Interleukin 8-like chemokines0.0003962Direct
4-helical cytokines0.2603Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Defensin0.000007471Direct
Toll/Interleukin receptor TIR domain0.0002839Direct
Interleukin 8-like chemokines0.0003748Direct
I set domains0.0007087Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Defensin-like0.000004821Direct
Toll/Interleukin receptor TIR domain0.0002344Direct
Interleukin 8-like chemokines0.0002421Direct
4-helical cytokines0.2189Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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