SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): pre-malignant neoplasm

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   disease [DOID:4] <8>
+ 1:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
0:   pre-malignant neoplasm [DOID:0060071] <4>(4|5) (4|4|3)
- 1:   in situ carcinoma [DOID:8719] <28>(4|5) (4|4|3)
- 1:   actinic keratosis [DOID:8866](0|0) (0|0|0)
- 1:   conjunctival intraepithelial neoplasm [DOID:5465](0|0) (0|0|0)
- 1:   corneal intraepithelial neoplasm [DOID:6198](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Globin-like0.00008965Direct
SOCS box-like0.000154Direct
Insulin-like0.000424Direct
SH2 domain0.002752Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Globins0.00007215Direct
SOCS box-like0.0001213Direct
L domain0.0003202Direct
Insulin-like0.0003202Direct
SH2 domain0.002579Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Globin-like0.00005254Direct
SOCS box-like0.00009202Direct
Insulin-like0.0002587Direct
SH2 domain0.001811Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.00000652Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0002587Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0002587Direct
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.001491Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.00002557Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0002587Direct
    57440,57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.0002587Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)