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Disease Ontology (DO): cell type benign neoplasm

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   disease [DOID:4] <8>
+ + 2:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ 1:   benign neoplasm [DOID:0060072] <2>(14|21) (16|14|9)
0:   cell type benign neoplasm [DOID:0060084] <18>(9|15) (11|13|8)
- 1:   hemangioma [DOID:255] <18>(2|4) (2|4|4)
- 1:   papilloma [DOID:2615] <11>(0|0) (0|0|0)
- 1:   adenoma [DOID:657] <9>(1|3) (2|1|1)
- 1:   leiomyoma [DOID:127] <9>(0|0) (0|0|0)
- 1:   lipoma [DOID:3315] <6>(0|0) (0|0|0)
- 1:   adenofibroma [DOID:2683] <4>(0|0) (0|0|0)
- 1:   benign mesothelioma [DOID:2645] <4>(1|1) (1|2|1)
- 1:   lymphangioma [DOID:1475] <2>(0|0) (0|0|0)
- 1:   angiomyolipoma [DOID:3314] <1>(0|0) (0|0|0)
- 1:   benign glioma [DOID:0060101] <1>(0|0) (0|0|0)
- 1:   chondroma [DOID:2602] <1>(0|0) (0|0|0)
- 1:   squamous cell neoplasm [DOID:3168] <1>(0|0) (0|0|0)
- 1:   ameloblastoma [DOID:0050894](0|0) (0|0|0)
- 1:   benign mastocytoma [DOID:4658](0|0) (0|0|0)
- 1:   fibroma [DOID:0050871](0|0) (0|0|0)
- 1:   ganglioglioma [DOID:5078](0|0) (0|0|0)
- 1:   gonadoblastoma [DOID:3301](0|0) (0|0|0)
- 1:   phaeochromocytoma [DOID:0050771](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
p53 tetramerization domain0Direct
Notch domain0.00003214Direct
Nuclear receptor ligand-binding domain0.00007217Direct
Lipoxigenase0.0001433Direct
Serine protease inhibitors0.0003199Direct
Heme-dependent peroxidases0.0008619Direct
PGBD-like0.0009003Direct
Inhibitor of apoptosis (IAP) repeat0.00512Inherited
p53-like transcription factors0.01092Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DEATH effector domain, DED0Direct
p53 tetramerization domain0Direct
p53 DNA-binding domain-like0Direct
Platelet-derived growth factor-like0.000001247Direct
Notch domain0.00002466Direct
Nuclear receptor ligand-binding domain0.00007179Direct
Animal lipoxigenases0.0001112Direct
Nuclear receptor0.0001928Direct
Myeloperoxidase-like0.0006766Direct
MMP N-terminal domain0.0007457Direct
Lipoxigenase N-terminal domain0.0009Direct
Glutathione peroxidase-like0.001056Inherited
Inhibitor of apoptosis (IAP) repeat0.004055Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.01462Inherited
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0.02601Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
p53 tetramerization domain0Direct
Notch domain0.00001829Direct
Nuclear receptor ligand-binding domain0.00004204Direct
Lipoxigenase0.00008521Direct
Serine protease inhibitors0.0001934Direct
Heme-dependent peroxidases0.0005382Direct
PGBD-like0.0005628Direct
Putative DNA-binding domain0.0007534Direct
Inhibitor of apoptosis (IAP) repeat0.003468Inherited
p53-like transcription factors0.00764Inherited
Thioredoxin-like0.3735Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49417,47719
  • 49417 - p53-like transcription factors
  • 47719 - p53 tetramerization domain
  • 0Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.00001829Direct
    49723,48484
  • 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
  • 48484 - Lipoxigenase
  • 0.00008521Direct
    103575,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
  • 0.0001934Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.000527Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.0005628Direct
    48726,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 0.0007534Direct
    57924,57924
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 0.0007534Direct
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.01258Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.6464Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.7089Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    47986,47986,52129
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 52129 - Caspase-like
  • 0Direct
    103575,81296,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.0001934Direct
    48726,56436,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.0007534Direct
    57184,57196,57184
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0007534Direct
    57440,57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.001786Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.7089Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.7089Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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