SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): breast ductal carcinoma

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   disease [DOID:4] <8>
+ + + + + + 6:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ + + + + 5:   cancer [DOID:162] <2>(115|181) (120|113|54)
+ + + + 4:   organ system cancer [DOID:0050686] <14>(66|106) (72|58|31)
+ + + 3:   thoracic cancer [DOID:5093] <3>(10|17) (13|12|7)
+ + 2:   breast cancer [DOID:1612] <18>(10|17) (13|12|7)
+ 1:   breast carcinoma [DOID:3459] <17>(5|9) (8|9|5)
0:   breast ductal carcinoma [DOID:3007] <1>(2|3) (2|6|3)
- 1:   invasive ductal carcinoma [DOID:3008](2|3) (2|6|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Kringle-like0.06116Inherited
SAM/Pointed domain0.1279Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Kringle modules0.003698Inherited
Ephrin receptor ligand binding domain0.02308Inherited
SAM (sterile alpha motif) domain0.07431Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Kringle-like0.04707Inherited
SAM/Pointed domain0.1028Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0.00003947Direct
    57440,50494
  • 57440 - Kringle-like
  • 50494 - Trypsin-like serine proteases
  • 0.0006017Direct
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.02505Inherited
    49785,57184
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 0.04707Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.08882Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.08882Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.000009352Direct
    49785,57184,49265
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0.000009352Direct
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.08882Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)