SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Disease Ontology (DO): bile duct cancer

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   disease [DOID:4] <8>
+ + + + + 5:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ + + + 4:   cancer [DOID:162] <2>(115|181) (120|113|54)
+ + + 3:   organ system cancer [DOID:0050686] <14>(66|106) (72|58|31)
+ + 2:   gastrointestinal system cancer [DOID:3119] <14>(12|23) (14|20|8)
+ 1:   biliary tract cancer [DOID:4607] <2>(2|4) (2|1|0)
0:   bile duct cancer [DOID:4606] <2>(2|4) (2|1|0)
- 1:   bile duct carcinoma [DOID:4897] <7>(2|4) (2|1|0)
- 1:   bile duct sarcoma [DOID:4064] <2>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Protein kinase-like (PK-like)0.1179Inherited
PGBD-like0.4557Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Phoshoinositide 3-kinase (PI3K), catalytic domain0.0007457Direct
Matrix metalloproteases, catalytic domain0.456Inherited
MMP N-terminal domain0.456Inherited
Platelet-derived growth factor-like0.5402Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Protein kinase-like (PK-like)0.09435Inherited
PGBD-like0.3973Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.3973Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)