SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): Barrett's esophagus

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   disease [DOID:4] <8>
+ + + 3:   disease of anatomical entity [DOID:7] <12>(143|187) (147|103|58)
+ + 2:   gastrointestinal system disease [DOID:77] <14>(33|43) (35|18|5)
+ 1:   esophageal disease [DOID:6050] <8>(4|3) (6|3|1)
0:   Barrett's esophagus [DOID:9206](3|3) (4|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PGBD-like0.0000354Direct
p53-like transcription factors0.00007312Direct
GST C-terminal domain-like0.0009754Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
MMP N-terminal domain0.00003077Direct
Matrix metalloproteases, catalytic domain0.00006692Direct
Glutathione S-transferase (GST), C-terminal domain0.0006684Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PGBD-like0.00002019Direct
p53-like transcription factors0.00004272Direct
GST C-terminal domain-like0.0006121Direct
Hemopexin-like domain0.0008768Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.00002019Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.0003258Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.0004069Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.0001957Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)