SUPERFAMILY 1.75 HMM library and genome assignments server

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Disease Ontology (DO): lymph node disease

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Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   disease [DOID:4] <8>
+ + + 3:   disease of anatomical entity [DOID:7] <12>(143|187) (147|103|58)
+ + 2:   immune system disease [DOID:2914] <4>(39|47) (42|27|16)
+ 1:   lymphatic system disease [DOID:75] <9>(4|7) (5|3|1)
0:   lymph node disease [DOID:9942] <2>(4|7) (5|3|1)
- 1:   lymphadenitis [DOID:1602] <6>(4|7) (5|3|1)
- 1:   persistent generalized lymphadenopathy [DOID:0060314](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.0000002308Direct
Hemopexin-like domain0.0000007007Direct
PGBD-like0.000007642Direct
Metalloproteases ("zincins"), catalytic domain0.00003773Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.0000001909Direct
C1 set domains (antibody constant domain-like)0.0000001909Direct
Matrix metalloproteases, catalytic domain0.0000004072Direct
Hemopexin-like domain0.0000005567Direct
MMP N-terminal domain0.000005895Direct
S100 proteins0.00004258Direct
TNF-like0.001039Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MHC antigen-recognition domain0.0000001155Direct
Hemopexin-like domain0.0000003587Direct
PGBD-like0.000004163Direct
Metalloproteases ("zincins"), catalytic domain0.00002151Direct
TNF-like0.0008431Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.0000000532Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.000003027Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.000004163Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.00005922Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)