SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Enzyme Commission (EC): Exodeoxyribonucleases producing 5'-phosphomonoesters

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: EC Hierarchy (from IntEnz release 70)

Shortest distance to current term (+ for parents, - for children) EC term [EC ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   root [root] <7>
+ + 2:   Hydrolases [3] <13>(395|668) (394|417|206)
+ 1:   Acting on ester bonds [3.1] <23>(157|226) (157|126|55)
0:   Exodeoxyribonucleases producing 5'-phosphomonoesters [3.1.11] <8>(11|8) (11|3|0)
- 1:   Adenosine-5'-diphospho-5'-(DNA) diphosphatase [3.1.11.7](2|1) (2|1|0)
- 1:   Exodeoxyribonuclease (lambda-induced) [3.1.11.3](1|1) (1|0|0)
- 1:   Exodeoxyribonuclease (phage SP3-induced) [3.1.11.4](0|0) (0|0|0)
- 1:   Exodeoxyribonuclease I [3.1.11.1](3|1) (3|1|0)
- 1:   Exodeoxyribonuclease III [3.1.11.2](3|2) (3|0|0)
- 1:   Exodeoxyribonuclease V [3.1.11.5](2|3) (2|1|0)
- 1:   Exodeoxyribonuclease VII [3.1.11.6](1|1) (1|0|0)
- 1:   Guaosine-5'-diphospho-5'-(DNA) diphosphatase [3.1.11.8](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HIT-like0Direct
SMAD/FHA domain0Direct
XseB-like0Direct
DNA clamp0Direct
Hedgehog/intein (Hint) domain0.00000000000002553Direct
Restriction endonuclease-like0.000000003835Direct
PIN domain-like0.000002429Direct
DNase I-like0.3746Inherited
P-loop containing nucleoside triphosphate hydrolases0.8331Inherited
Metallo-dependent phosphatases0.9741Inherited
Ribonuclease H-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
FHA domain0Direct
Exodeoxyribonuclease V beta chain (RecB), C-terminal domain0Direct
Exodeoxyribonuclease V beta chain (RecC), C-terminal domain0Direct
XseB-like0Direct
Tandem AAA-ATPase domain0.000000000000002189Direct
DnaQ-like 3'-5' exonuclease0.000001301Direct
5' to 3' exonuclease catalytic domain0.000002017Direct
DNase I-like0.0001484Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
XseB-like0Direct
SMAD/FHA domain0Direct
HIT-like0Direct
DNA clamp0Direct
Hedgehog/intein (Hint) domain0.00000000000001805Direct
Restriction endonuclease-like0.00000000288Direct
PIN domain-like0.000001908Direct
DNase I-like0.3394Inherited
P-loop containing nucleoside triphosphate hydrolases0.7682Inherited
Metallo-dependent phosphatases0.9018Inherited
Ribonuclease H-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50249,56300
  • 50249 - Nucleic acid-binding proteins
  • 56300 - Metallo-dependent phosphatases
  • 0Direct
    49879,54197
  • 49879 - SMAD/FHA domain
  • 54197 - HIT-like
  • 0Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00002812Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)