SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Fly Anatomy (FA): brain

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: FA Hierarchy (fly anatomy from FlyBase anatomy ontology)

Shortest distance to current term (+ for parents, - for children) FA term [FA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   anatomical entity [FBbt:99999999] <4>
+ + + + 4:   organism [FBbt:00000001] <12>(200|210) (201|92|30)
+ + + + 4:   material anatomical entity [FBbt:00007016] <6>(240|245) (239|100|32)
+ + + 3:   organ system [FBbt:00004856] <9>(142|161) (143|78|27)
+ + + 3:   anatomical structure [FBbt:00007001] <6>(240|245) (239|100|32)
+ + 2:   organ system subdivision [FBbt:00007330] <9>(65|91) (67|43|15)
+ + 2:   nervous system [FBbt:00005093] <13>(43|57) (46|26|12)
+ + 2:   multicellular structure [FBbt:00100313] <96>(235|240) (235|100|31)
+ 1:   central nervous system [FBbt:00005094] <18>(21|24) (23|10|5)
+ 1:   multi-tissue structure [FBbt:00007010] <27>(47|61) (48|32|9)
0:   brain [FBbt:00005095] <14>(7|7) (10|6|2)
- 1:   adult brain [FBbt:00003624] <275>(6|5) (8|6|2)
- 1:   embryonic/larval brain [FBbt:00001920] <52>(1|1) (1|0|0)
- 1:   supraesophageal ganglion [FBbt:00003626] <7>(7|7) (9|6|2)
- 1:   pupal brain [FBbt:00110194] <6>(0|0) (0|0|0)
- 1:   embryonic brain [FBbt:00001060] <5>(1|1) (1|0|0)
- 1:   serotonergic IP neuron [FBbt:00001587] <5>(0|0) (0|0|0)
- 1:   central brain [FBbt:00047888] <4>(7|5) (7|3|2)
- 1:   antennal lobe [FBbt:00003924] <3>(3|3) (3|3|1)
- 1:   pars intercerebralis [FBbt:00005802] <3>(0|0) (0|0|0)
- 1:   serotonergic LP neuron [FBbt:00047314] <3>(0|0) (0|0|0)
- 1:   epithelial glial cell [FBbt:00005721] <2>(0|0) (0|0|0)
- 1:   pars lateralis [FBbt:00110567] <2>(0|0) (0|0|0)
- 1:   adult serotonergic DP neuron [FBbt:00047326](0|0) (0|0|0)
- 1:   precursor of adult central brain neuropil glia [FBbt:00047884](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Immunoglobulin0.006011Inherited
lambda repressor-like DNA-binding domains0.01265Inherited
Nuclear receptor ligand-binding domain0.01381Inherited
Fibronectin type III0.03848Inherited
(Phosphotyrosine protein) phosphatases II0.07509Inherited
dsRNA-binding domain-like0.197Inherited
Homeodomain-like0.4423Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
I set domains0.00352Inherited
Nuclear receptor ligand-binding domain0.01132Inherited
POU-specific domain0.02256Inherited
Fibronectin type III0.03365Inherited
Nuclear receptor0.04507Inherited
Extracellular domain of cell surface receptors0.049Inherited
Homeodomain0.2315Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Immunoglobulin0.004376Inherited
lambda repressor-like DNA-binding domains0.009512Inherited
Nuclear receptor ligand-binding domain0.01042Inherited
Plexin repeat0.02175Inherited
Fibronectin type III0.03031Inherited
SMAD MH1 domain0.04844Inherited
(Phosphotyrosine protein) phosphatases II0.06159Inherited
Snake toxin-like0.06472Inherited
dsRNA-binding domain-like0.1716Inherited
Homeodomain-like0.4098Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.002809Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.009512Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.06472Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.06951Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1232Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.1232Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.008503Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02294Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)