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Fly Anatomy (FA): germline cell

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: FA Hierarchy (fly anatomy from FlyBase anatomy ontology)

Shortest distance to current term (+ for parents, - for children) FA term [FA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical entity [FBbt:99999999] <4>
+ + + 3:   material anatomical entity [FBbt:00007016] <6>(240|245) (239|100|32)
+ + 2:   anatomical structure [FBbt:00007001] <6>(240|245) (239|100|32)
+ 1:   cell [FBbt:00007002] <7>(77|96) (78|38|15)
0:   germline cell [FBbt:00004860] <5>(10|10) (10|3|2)
- 1:   male germline cell [FBbt:00057011] <5>(3|2) (3|1|1)
- 1:   female germline cell [FBbt:00057012] <4>(1|2) (1|1|0)
- 1:   germline stem cell [FBbt:00004861] <3>(4|2) (4|0|0)
- 1:   gamete [FBbt:00005412] <2>(2|3) (2|1|1)
- 1:   pole cell [FBbt:00000092](1|0) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
dsRNA-binding domain-like0.0004686Direct
Tubulin C-terminal domain-like0.0007222Direct
PAZ domain0.001637Inherited
Tubulin nucleotide-binding domain-like0.003592Inherited
SMAD MH1 domain0.02244Inherited
Integrin domains0.02244Inherited
SMAD/FHA domain0.0678Inherited
Cyclin-like0.07933Inherited
Spectrin repeat0.09059Inherited
Snake toxin-like0.1128Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
Motor proteins0.00003099Direct
Tubulin, C-terminal domain0.0004814Direct
Double-stranded RNA-binding domain (dsRBD)0.0008137Direct
Tubulin, GTPase domain0.002507Inherited
SMAD MH1 domain0.01698Inherited
RecA protein-like (ATPase-domain)0.01752Inherited
SMAD domain0.01752Inherited
Cyclin0.05643Inherited
Spectrin repeat0.07341Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
dsRNA-binding domain-like0.0003438Direct
Tubulin C-terminal domain-like0.0005232Direct
PAZ domain0.001176Inherited
Tubulin nucleotide-binding domain-like0.002592Inherited
SMAD MH1 domain0.01735Inherited
Integrin domains0.01735Inherited
SMAD/FHA domain0.05521Inherited
Cyclin-like0.06523Inherited
Spectrin repeat0.07498Inherited
Snake toxin-like0.0949Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0005232Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.07498Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.07702Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.01735Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.01972Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)