SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Fly Anatomy (FA): central nervous system

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: FA Hierarchy (fly anatomy from FlyBase anatomy ontology)

Shortest distance to current term (+ for parents, - for children) FA term [FA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   anatomical entity [FBbt:99999999] <2>
+ + + + 4:   material anatomical entity [FBbt:00007016] <6>(235|242) (234|99|30)
+ + + 3:   organism [FBbt:00000001] <12>(191|199) (193|89|28)
+ + + 3:   anatomical structure [FBbt:00007001] <6>(235|242) (234|99|30)
+ + 2:   organ system [FBbt:00004856] <9>(140|157) (143|76|26)
+ + 2:   multicellular structure [FBbt:00100313] <96>(229|234) (229|97|29)
+ 1:   nervous system [FBbt:00005093] <13>(46|60) (51|28|12)
+ 1:   organ system subdivision [FBbt:00007330] <9>(69|91) (71|44|15)
0:   central nervous system [FBbt:00005094] <18>(21|25) (23|12|5)
- 1:   adult central nervous system [FBbt:00003623] <47>(6|5) (8|6|2)
- 1:   embryonic/larval central nervous system [FBbt:00001919] <36>(9|13) (9|3|2)
- 1:   brain [FBbt:00005095] <14>(7|8) (10|8|2)
- 1:   CNS glial cell [FBbt:00001256] <11>(3|3) (3|1|1)
- 1:   neuromere [FBbt:00005140] <9>(7|6) (10|6|1)
- 1:   nerve root [FBbt:00007602] <8>(0|0) (0|0|0)
- 1:   extrinsic neuron [FBbt:00003660] <7>(3|2) (3|1|0)
- 1:   stomatogastric nervous system [FBbt:00005096] <6>(1|1) (1|0|0)
- 1:   subesophageal ganglion [FBbt:00004013] <6>(2|1) (2|0|0)
- 1:   cell body rind of the central nervous system [FBbt:00007114] <4>(0|1) (0|0|0)
- 1:   neuropil [FBbt:00005139] <3>(15|14) (17|8|3)
- 1:   pupal central nervous system [FBbt:00110193] <2>(0|0) (0|0|0)
- 1:   longitudinal subdivision of central nervous system [FBbt:00007701] <1>(0|0) (0|0|0)
- 1:   neuropil glial sheath [FBbt:00007117] <1>(2|2) (2|2|1)
- 1:   ventral nervous system [FBbt:00005097] <1>(3|2) (3|1|1)
- 1:   SP1 neuron [FBbt:00001367](0|0) (0|0|0)
- 1:   adult anterior large descending DN Tachykinin neuron [FBbt:00110049](0|0) (0|0|0)
- 1:   neural lamella [FBbt:00007088](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
lambda repressor-like DNA-binding domains0Direct
Cytokine0Direct
Sema domain0Direct
Immunoglobulin0.001023Inherited
Fibronectin type III0.005404Inherited
Plexin repeat0.0237Inherited
(Phosphotyrosine protein) phosphatases II0.02836Inherited
dsRNA-binding domain-like0.0413Inherited
Toll/Interleukin receptor TIR domain0.04641Inherited
Protein kinase-like (PK-like)0.05475Inherited
Spectrin repeat0.07137Inherited
SMAD MH1 domain0.08736Inherited
Homeodomain-like0.09905Inherited
Growth factor receptor domain0.1036Inherited
Nuclear receptor ligand-binding domain0.1075Inherited
Cytochrome P4500.1392Inherited
Orange domain-like0.1485Inherited
EGF/Laminin0.2875Inherited
SH2 domain0.5694Inherited
HLH, helix-loop-helix DNA-binding domain0.6231Inherited
beta-beta-alpha zinc fingers1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0Direct
Integrin domains0Direct
Single strand DNA-binding domain, SSB0Direct
Extracellular domain of cell surface receptors0Direct
POU-specific domain0Direct
Choline/Carnitine O-acyltransferase0Direct
Fibroblast growth factors (FGF)0Direct
I set domains0.001394Inherited
Fibronectin type III0.006107Inherited
Plexin repeat0.02072Inherited
Homeodomain0.02734Inherited
Toll/Interleukin receptor TIR domain0.03987Inherited
Spectrin repeat0.06398Inherited
SMAD MH1 domain0.07722Inherited
Paired domain0.08009Inherited
Nuclear receptor ligand-binding domain0.1038Inherited
Nuclear receptor0.1073Inherited
Protein kinases, catalytic subunit0.1142Inherited
Ubiquitin-related0.1322Inherited
Cytochrome P4500.1322Inherited
EGF-type module0.2015Inherited
Hairy Orange domain0.2108Inherited
Forkhead DNA-binding domain0.2956Inherited
SH2 domain0.5772Inherited
HLH, helix-loop-helix DNA-binding domain0.6527Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sema domain0Direct
Cytokine0Direct
lambda repressor-like DNA-binding domains0Direct
Immunoglobulin0.0007422Direct
Fibronectin type III0.003938Inherited
Snake toxin-like0.01829Inherited
Plexin repeat0.01829Inherited
(Phosphotyrosine protein) phosphatases II0.02199Inherited
dsRNA-binding domain-like0.03255Inherited
Toll/Interleukin receptor TIR domain0.03681Inherited
Protein kinase-like (PK-like)0.04382Inherited
Spectrin repeat0.05816Inherited
SMAD MH1 domain0.07228Inherited
Homeodomain-like0.08245Inherited
Growth factor receptor domain0.08651Inherited
Nuclear receptor ligand-binding domain0.09009Inherited
Cytochrome P4500.1182Inherited
Orange domain-like0.1266Inherited
EGF/Laminin0.2573Inherited
p53-like transcription factors0.3361Inherited
SH2 domain0.5394Inherited
HLH, helix-loop-helix DNA-binding domain0.5942Inherited
beta-beta-alpha zinc fingers1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    52777,52777
  • 52777 - CoA-dependent acyltransferases
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    47769,47769
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 0Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001747Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.03829Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.05816Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.1266Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.1758Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1895Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3546Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,49899,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.001171Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.01781Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.1024Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1266Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)