SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Fly Anatomy (FA): female germline cyst

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: FA Hierarchy (fly anatomy from FlyBase anatomy ontology)

Shortest distance to current term (+ for parents, - for children) FA term [FA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   anatomical entity [FBbt:99999999] <4>
+ + + + + 5:   material anatomical entity [FBbt:00007016] <6>(240|245) (239|100|32)
+ + + + 4:   anatomical structure [FBbt:00007001] <6>(240|245) (239|100|32)
+ + + 3:   multicellular structure [FBbt:00100313] <96>(235|240) (235|100|31)
+ + 2:   multi-tissue structure [FBbt:00007010] <27>(47|61) (48|32|9)
+ 1:   germline cyst [FBbt:00004875] <2>(11|10) (11|6|2)
0:   female germline cyst [FBbt:00007137] <2>(8|8) (8|5|2)
- 1:   egg chamber [FBbt:00004894] <5>(6|5) (6|3|1)
- 1:   nurse cell ring canal [FBbt:00004879] <1>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0Direct
alpha-catenin/vinculin-like0Direct
Cullin homology domain0.0001819Direct
SH2 domain0.0005662Direct
Cullin repeat-like0.0009943Direct
Integrin domains0.004959Inherited
Actin depolymerizing proteins0.01024Inherited
Spectrin repeat0.03219Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0Direct
Integrin domains0Direct
SCF ubiquitin ligase complex WHB domain0.0001473Direct
Cullin homology domain0.0001473Direct
SH2 domain0.0005758Direct
Cullin repeat0.0008149Direct
RecA protein-like (ATPase-domain)0.01358Inherited
Spectrin repeat0.02847Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
alpha-catenin/vinculin-like0Direct
Frizzled cysteine-rich domain0Direct
Cullin homology domain0.0001333Direct
SH2 domain0.0004152Direct
Cullin repeat-like0.0007163Direct
Integrin domains0.003592Inherited
Actin depolymerizing proteins0.00762Inherited
Spectrin repeat0.0252Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0001333Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0007163Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.0007163Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.01503Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0007163Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.003007Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)