SUPERFAMILY 1.75 HMM library and genome assignments server

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Fly Phenotype (FP): some die during pupal stage

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Root: FP Hierarchy (fly phenotype from FlyBase controlled vocabulary with sub-ontology "phenotypic class")

Shortest distance to current term (+ for parents, - for children) FP term [FP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   phenotypic class [FBcv:0000347] <4>
+ + + + 4:   phenotype [FBcv:0001347] <62>(175|208) (176|81|29)
+ + + 3:   increased mortality [FBcv:0002004] <2>(55|72) (55|19|7)
+ + 2:   increased mortality during development [FBcv:0002019] <6>(42|60) (42|14|6)
+ 1:   some die during P-stage [FBcv:0002020] <4>(2|4) (2|2|1)
0:   some die during pupal stage [FBcv:0002039] <1>(1|3) (1|2|1)
- 1:   majority die during pupal stage [FBcv:0002034] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ARID-like0.0000918Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
ARID domain0.0000642Direct
Zf-UBP0.0006766Direct
EGF-type module0.0007566Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ARID-like0.00006881Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 0.0001738Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000732Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57850,57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)