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Phenotypic Abnormality (PA): Abnormality of the urinary system

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
0:   Abnormality of the urinary system [HP:0000079] <4>(38|41) (45|15|7)
- 1:   Abnormality of the urinary system physiology [HP:0011277] <3>(23|26) (28|9|5)
- 1:   Abnormality of the lower urinary tract [HP:0010936] <2>(4|2) (6|2|0)
- 1:   Abnormality of the upper urinary tract [HP:0010935] <2>(21|22) (22|7|3)
- 1:   Urinary tract atresia [HP:0000809](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tricorn protease domain 20Direct
Lamin A/C globular tail domain0Direct
Smc hinge domain0Direct
SAND domain-like0Direct
PRTase-like0Direct
(Trans)glycosidases0.004555Inherited
Transcription factor STAT-4 N-domain0.02011Inherited
STAT0.02011Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.02355Inherited
Acyl-CoA dehydrogenase NM domain-like0.02355Inherited
GroEL equatorial domain-like0.04033Inherited
Adenine nucleotide alpha hydrolases-like0.059Inherited
PreATP-grasp domain0.0694Inherited
L-aspartase-like0.07828Inherited
4Fe-4S ferredoxins0.07828Inherited
C-type lectin-like0.09692Inherited
Alkaline phosphatase-like0.1169Inherited
Glutathione synthetase ATP-binding domain-like0.12Inherited
Actin-like ATPase domain0.1405Inherited
Acyl-CoA N-acyltransferases (Nat)0.1781Inherited
Clc chloride channel0.1846Inherited
MHC antigen-recognition domain0.2882Inherited
Mitochondrial carrier0.3413Inherited
Cysteine-rich domain0.3664Inherited
HMG-box0.4644Inherited
FYVE/PHD zinc finger0.4701Inherited
Trypsin-like serine proteases0.5219Inherited
Complement control module/SCR domain0.5297Inherited
Cytokine0.5799Inherited
ARID-like0.6862Inherited
WD40 repeat-like0.8048Inherited
TNF-like0.8121Inherited
ClpP/crotonase0.8739Inherited
SET domain0.8872Inherited
TPR-like0.8967Inherited
Immunoglobulin0.9296Inherited
L domain-like0.9417Inherited
Homeodomain-like0.9778Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Formate/glycerate dehydrogenases, substrate-binding domain0Direct
alpha-Amylases, C-terminal beta-sheet domain0Direct
Lamin A/C globular tail domain0Direct
beta-glycanases0Direct
Cystathionine synthase-like0Direct
Smc hinge domain0Direct
DIX domain0Direct
HCDH C-domain-like0Direct
Phosphoribosyltransferases (PRTases)0Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.001317Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.001317Inherited
BC N-terminal domain-like0.01452Inherited
Transcription factor STAT-4 N-domain0.01452Inherited
STAT DNA-binding domain0.01452Inherited
STAT0.01452Inherited
BC ATP-binding domain-like0.01452Inherited
Noncollagenous (NC1) domain of collagen IV0.08565Inherited
Clc chloride channel0.1589Inherited
C1 set domains (antibody constant domain-like)0.2076Inherited
Arylsulfatase0.2076Inherited
Cytochrome P4500.2525Inherited
MHC antigen-recognition domain0.2527Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.2891Inherited
Cytoplasmic domain of inward rectifier potassium channel0.3069Inherited
Actin/HSP700.3069Inherited
Integrin alpha N-terminal domain0.3069Inherited
Fibroblast growth factors (FGF)0.3111Inherited
Mitochondrial carrier0.3111Inherited
HMG-box0.4273Inherited
Complement control module/SCR domain0.5001Inherited
Eukaryotic proteases0.5047Inherited
Histone lysine methyltransferases0.5068Inherited
PHD domain0.5576Inherited
ARID domain0.6549Inherited
Crotonase-like0.7368Inherited
RecA protein-like (ATPase-domain)0.7765Inherited
TNF-like0.7941Inherited
Voltage-gated potassium channels0.9365Inherited
WD40-repeat0.9485Inherited
Ngr ectodomain-like0.9514Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Smc hinge domain0Direct
Tricorn protease domain 20Direct
SAND domain-like0Direct
PRTase-like0Direct
Lamin A/C globular tail domain0Direct
(Trans)glycosidases0.002746Inherited
Transcription factor STAT-4 N-domain0.01368Inherited
STAT0.01368Inherited
Acyl-CoA dehydrogenase NM domain-like0.01624Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.01624Inherited
GroEL equatorial domain-like0.02901Inherited
Adenine nucleotide alpha hydrolases-like0.04419Inherited
PreATP-grasp domain0.0528Inherited
L-aspartase-like0.06014Inherited
4Fe-4S ferredoxins0.06014Inherited
C-type lectin-like0.07596Inherited
Alkaline phosphatase-like0.09284Inherited
Glutathione synthetase ATP-binding domain-like0.09564Inherited
Actin-like ATPase domain0.114Inherited
Acyl-CoA N-acyltransferases (Nat)0.1471Inherited
CBS-domain pair0.1483Inherited
Clc chloride channel0.1529Inherited
MHC antigen-recognition domain0.249Inherited
Cytochrome P4500.2897Inherited
Mitochondrial carrier0.2999Inherited
Cysteine-rich domain0.3238Inherited
HMG-box0.4204Inherited
FYVE/PHD zinc finger0.4264Inherited
Trypsin-like serine proteases0.4773Inherited
Complement control module/SCR domain0.4854Inherited
Integrin domains0.5005Inherited
Cytokine0.5371Inherited
RING/U-box0.5429Inherited
ARID-like0.6469Inherited
E set domains0.7162Inherited
WD40 repeat-like0.77Inherited
TNF-like0.7774Inherited
ClpP/crotonase0.8429Inherited
SET domain0.8573Inherited
ARM repeat0.8633Inherited
TPR-like0.8672Inherited
Immunoglobulin0.9025Inherited
L domain-like0.9154Inherited
Voltage-gated potassium channels0.9263Inherited
Homeodomain-like0.955Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.01368Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.01368Inherited
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.01368Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.01624Inherited
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
  • 0.06014Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.08191Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1382Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.2373Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.249Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.249Inherited
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.2999Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.3031Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.3031Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.7045Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.01368Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.01368Inherited
    57535,57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.249Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3031Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.4183Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.5005Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)