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Phenotypic Abnormality (PA): Abnormality of reproductive system physiology

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
+ 1:   Abnormality of the genital system [HP:0000078] <3>(35|34) (37|10|3)
0:   Abnormality of reproductive system physiology [HP:0000080] <5>(9|9) (11|3|2)
- 1:   Abnormal libido [HP:0031845] <4>(0|1) (1|0|0)
- 1:   Abnormal male reproductive system physiology [HP:0012874] <4>(2|3) (3|0|1)
- 1:   Hypogonadism [HP:0000135] <4>(6|5) (7|3|1)
- 1:   Decreased fertility [HP:0000144] <3>(1|2) (1|0|1)
- 1:   Abnormal female reproductive system physiology [HP:0030012] <2>(1|1) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Restriction endonuclease-like0Direct
GAF domain-like0.003127Inherited
RuvA domain 2-like0.003127Inherited
Family A G protein-coupled receptor-like0.02438Inherited
HD-domain/PDEase-like0.02758Inherited
Chromo domain-like0.05136Inherited
Ribonuclease H-like0.2266Inherited
HMG-box0.5782Inherited
RNA-binding domain, RBD0.6185Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
XPF/Rad1/Mus81 nuclease0Direct
PDEase0.0007421Direct
GAF domain0.001897Inherited
Rhodopsin-like0.0187Inherited
Chromo domain0.03834Inherited
DNA polymerase I0.03834Inherited
RecA protein-like (ATPase-domain)0.1895Inherited
Canonical RBD0.4269Inherited
HMG-box0.5377Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Restriction endonuclease-like0Direct
GAF domain-like0.001819Inherited
RuvA domain 2-like0.001819Inherited
Family A G protein-coupled receptor-like0.01685Inherited
HD-domain/PDEase-like0.01924Inherited
Chromo domain-like0.03798Inherited
DNA/RNA polymerases0.1035Inherited
Ribonuclease H-like0.1917Inherited
Immunoglobulin0.3321Inherited
HMG-box0.5354Inherited
RNA-binding domain, RBD0.5767Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52980,47781
  • 52980 - Restriction endonuclease-like
  • 47781 - RuvA domain 2-like
  • 0Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.001819Inherited
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.001819Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.001819Inherited
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03798Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)