SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of the rectum

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|46|25)
+ + + 3:   Abnormality of digestive system morphology [HP:0025033] <2>(13|19) (17|8|4)
+ + + 3:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(24|27) (28|13|4)
+ + 2:   Morphological abnormality of the gastrointestinal tract [HP:0012718] <8>(13|19) (17|8|4)
+ + 2:   Abnormal intestine morphology [HP:0002242] <22>(8|11) (12|3|0)
+ 1:   Abnormal large intestine morphology [HP:0002250] <13>(5|5) (6|2|0)
+ 1:   Anorectal anomaly [HP:0012732] <2>(5|6) (5|3|1)
0:   Abnormality of the rectum [HP:0002034] <7>(3|3) (3|2|0)
- 1:   Rectal fistula [HP:0100590] <4>(0|0) (0|0|0)
- 1:   Neoplasm of the rectum [HP:0100743] <2>(2|3) (2|2|0)
- 1:   Rectal prolapse [HP:0002035] <1>(0|0) (0|0|0)
- 1:   Hemorrhoids [HP:0032551](0|0) (0|0|0)
- 1:   Megarectum [HP:0025024](0|0) (0|0|0)
- 1:   Rectal abscess [HP:0005224](0|0) (0|0|0)
- 1:   Rectal atresia [HP:0025023](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.000008204Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00003665Direct
Ribosomal protein S5 domain 2-like0.00005039Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, N-terminal domain0.0000001434Direct
DNA gyrase/MutL, second domain0.0000001434Direct
DNA repair protein MutS, domain III0.000005368Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.000003423Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00001626Direct
Ribosomal protein S5 domain 2-like0.00002264Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.00000008119Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000003423Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)