SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Pulmonary fibrosis

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the respiratory system [HP:0002086] <3>(30|35) (38|24|21)
+ + 2:   Abnormal respiratory system morphology [HP:0012252] <5>(20|25) (26|18|17)
+ 1:   Abnormal lung morphology [HP:0002088] <28>(11|18) (18|11|7)
0:   Pulmonary fibrosis [HP:0002206] <1>(0|1) (1|1|0)
- 1:   Bilateral basilar pulmonary fibrosis [HP:0550005](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.0009551Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MHC antigen-recognition domain0.0009328Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.0009328Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)