SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of the upper urinary tract

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
+ 1:   Abnormality of the urinary system [HP:0000079] <4>(38|41) (45|15|7)
0:   Abnormality of the upper urinary tract [HP:0010935] <2>(21|22) (22|7|3)
- 1:   Abnormality of the kidney [HP:0000077] <3>(17|16) (18|6|3)
- 1:   Abnormality of the ureter [HP:0000069] <3>(4|5) (4|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Tricorn protease domain 20Direct
PRTase-like0Direct
WD40 repeat-like0.02795Inherited
4Fe-4S ferredoxins0.02802Inherited
C-type lectin-like0.05229Inherited
HMG-box0.06738Inherited
Acyl-CoA N-acyltransferases (Nat)0.071Inherited
SET domain0.08294Inherited
Cysteine-rich domain0.1034Inherited
FYVE/PHD zinc finger0.1369Inherited
Complement control module/SCR domain0.1656Inherited
Homeodomain-like0.1805Inherited
Trypsin-like serine proteases0.2188Inherited
ARID-like0.3809Inherited
GroEL equatorial domain-like0.3809Inherited
Cytokine0.4331Inherited
TNF-like0.4885Inherited
Actin-like ATPase domain0.5048Inherited
TPR-like0.5296Inherited
MHC antigen-recognition domain0.5476Inherited
L domain-like0.7057Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cystathionine synthase-like0Direct
DIX domain0Direct
Phosphoribosyltransferases (PRTases)0Direct
PHD domain0.01741Inherited
Histone lysine methyltransferases0.01961Inherited
Noncollagenous (NC1) domain of collagen IV0.02362Inherited
HMG-box0.05351Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.08015Inherited
Eukaryotic proteases0.09174Inherited
Complement control module/SCR domain0.1439Inherited
WD40-repeat0.2529Inherited
Cytoplasmic domain of inward rectifier potassium channel0.2643Inherited
Fibroblast growth factors (FGF)0.2643Inherited
Actin/HSP700.2643Inherited
RecA protein-like (ATPase-domain)0.2643Inherited
Homeodomain0.2702Inherited
ARID domain0.345Inherited
C1 set domains (antibody constant domain-like)0.4277Inherited
TNF-like0.4588Inherited
MHC antigen-recognition domain0.5126Inherited
Ngr ectodomain-like0.6598Inherited
Voltage-gated potassium channels0.8547Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tricorn protease domain 20Direct
PRTase-like0Direct
WD40 repeat-like0.01952Inherited
4Fe-4S ferredoxins0.01956Inherited
C-type lectin-like0.0387Inherited
HMG-box0.05113Inherited
Acyl-CoA N-acyltransferases (Nat)0.05413Inherited
SET domain0.06411Inherited
Cysteine-rich domain0.08145Inherited
FYVE/PHD zinc finger0.1108Inherited
Complement control module/SCR domain0.136Inherited
E set domains0.1482Inherited
Homeodomain-like0.1494Inherited
Trypsin-like serine proteases0.1845Inherited
ARID-like0.3378Inherited
GroEL equatorial domain-like0.3378Inherited
Cytokine0.3892Inherited
TNF-like0.4443Inherited
Actin-like ATPase domain0.4605Inherited
TPR-like0.4853Inherited
MHC antigen-recognition domain0.5037Inherited
L domain-like0.6668Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.008704Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.0224Inherited
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.06411Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.08108Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.2587Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.5037Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.5341Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57535,57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.01828Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.03217Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1698Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)