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Phenotypic Abnormality (PA): Abnormality of long bone morphology

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the skeletal system [HP:0000924] <7>(88|98) (93|54|34)
+ + 2:   Abnormality of skeletal morphology [HP:0011842] <17>(86|89) (90|52|33)
+ 1:   Abnormal appendicular skeleton morphology [HP:0011844] <4>(35|42) (39|23|23)
0:   Abnormality of long bone morphology [HP:0011314] <18>(6|10) (6|3|1)
- 1:   Abnormality of epiphysis morphology [HP:0005930] <21>(3|2) (3|0|0)
- 1:   Abnormal humerus morphology [HP:0031095] <19>(0|0) (0|0|0)
- 1:   Abnormality of the metaphysis [HP:0000944] <19>(2|5) (2|1|0)
- 1:   Abnormal diaphysis morphology [HP:0000940] <9>(0|1) (0|0|0)
- 1:   Abnormal morphology of the radius [HP:0045009] <8>(0|0) (0|0|0)
- 1:   Short long bone [HP:0003026] <7>(0|1) (0|1|1)
- 1:   Broad long bones [HP:0005622] <5>(0|0) (0|0|0)
- 1:   Increased density of long bones [HP:0006392] <4>(0|0) (0|0|0)
- 1:   Slender long bone [HP:0003100] <4>(0|0) (0|0|0)
- 1:   Thickened cortex of long bones [HP:0000935] <4>(0|0) (0|0|0)
- 1:   Phocomelia [HP:0009829] <3>(0|0) (0|0|0)
- 1:   Abnormal morphology of ulna [HP:0040071] <2>(0|1) (0|0|0)
- 1:   Fractures of the long bones [HP:0003084] <2>(0|0) (0|0|0)
- 1:   Pseudoarthrosis [HP:0005864] <2>(0|0) (0|0|0)
- 1:   Crumpled long bones [HP:0006367](0|0) (0|0|0)
- 1:   Overtubulated long bones [HP:0006391](0|0) (0|0|0)
- 1:   Periosteal thickening of long tubular bones [HP:0006465](0|0) (0|0|0)
- 1:   Protuberances at ends of long bones [HP:0003105](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RuvA domain 2-like0Direct
PGBD-like0.09006Inherited
Hemopexin-like domain0.2003Inherited
FnI-like domain0.3001Inherited
Cytochrome P4500.3518Inherited
Concanavalin A-like lectins/glucanases0.6264Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
XPF/Rad1/Mus81 nuclease0Direct
Exostosin0Direct
Fibronectin type II module0.006888Inherited
RecA protein-like (ATPase-domain)0.03672Inherited
Inositol polyphosphate 5-phosphatase (IPP5)0.07276Inherited
MMP N-terminal domain0.07276Inherited
Matrix metalloproteases, catalytic domain0.07276Inherited
Hemopexin-like domain0.1718Inherited
Growth factor receptor domain0.181Inherited
TSP-1 type 1 repeat0.2668Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RuvA domain 2-like0Direct
PGBD-like0.07011Inherited
Hemopexin-like domain0.1676Inherited
FnI-like domain0.2602Inherited
Cytochrome P4500.3099Inherited
Concanavalin A-like lectins/glucanases0.5851Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52980,47781
  • 52980 - Restriction endonuclease-like
  • 47781 - RuvA domain 2-like
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.07011Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.07011Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.07011Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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