SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Abnormality of refraction

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the eye [HP:0000478] <2>(64|78) (69|38|28)
+ 1:   Abnormal eye physiology [HP:0012373] <17>(34|47) (37|22|20)
0:   Abnormality of refraction [HP:0000539] <4>(2|4) (2|1|7)
- 1:   Astigmatism [HP:0000483] <9>(0|0) (0|0|0)
- 1:   Myopia [HP:0000545] <5>(2|3) (2|1|7)
- 1:   Hypermetropia [HP:0000540] <3>(0|0) (0|0|0)
- 1:   Anisometropia [HP:0012803](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
gamma-Crystallin-like0.0005278Direct
Hect, E3 ligase catalytic domain0.03221Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Crystallins/Ca-binding development proteins0.000249Direct
Noncollagenous (NC1) domain of collagen IV0.0005803Direct
VWC domain0.0009529Direct
Hect, E3 ligase catalytic domain0.02097Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
gamma-Crystallin-like0.0002673Direct
Hect, E3 ligase catalytic domain0.02275Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.0003018Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57581,57196
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 0Direct
    57196,57196,57581
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0Direct
    57196,57581,57184
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.001036Inherited
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.004475Inherited
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.01256Inherited
    57184,57196,57184
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.01256Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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