SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Coloboma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the eye [HP:0000478] <2>(63|76) (67|38|28)
+ 1:   Abnormal eye morphology [HP:0012372] <12>(39|47) (39|30|23)
0:   Coloboma [HP:0000589] <6>(2|2) (2|0|0)
- 1:   Retinal coloboma [HP:0000480] <2>(0|0) (0|0|0)
- 1:   Chorioretinal coloboma [HP:0000567] <1>(0|0) (0|0|0)
- 1:   Ciliary body coloboma [HP:0020006](0|0) (0|0|0)
- 1:   Iris coloboma [HP:0000612](2|2) (2|0|0)
- 1:   Lens coloboma [HP:0100719](0|0) (0|0|0)
- 1:   Optic nerve coloboma [HP:0000588](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0.0004209Direct
gamma-Crystallin-like0.002119Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0.0000546Direct
Crystallins/Ca-binding development proteins0.001274Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0.0002169Direct
gamma-Crystallin-like0.001216Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)