SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Optic atrophy

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Phenotypic abnormality [HP:0000118] <25>
+ + + + + + 6:   Abnormality of the eye [HP:0000478] <2>(64|78) (69|38|28)
+ + + + + 5:   Abnormal eye morphology [HP:0012372] <12>(39|48) (41|29|22)
+ + + + 4:   Abnormal posterior eye segment morphology [HP:0004329] <3>(16|11) (17|6|8)
+ + + 3:   Abnormal fundus morphology [HP:0001098] <10>(15|11) (16|6|8)
+ + 2:   Abnormality of the optic nerve [HP:0000587] <14>(4|5) (4|1|0)
+ 1:   Abnormality of the optic disc [HP:0012795] <6>(1|3) (1|0|0)
0:   Optic atrophy [HP:0000648] <1>(1|2) (1|0|0)
- 1:   Optic atrophy from cranial nerve compression [HP:0007958](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.0009036Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
IF2B-like0Direct
Ferredoxin domains from multidomain proteins0Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleotide-diphospho-sugar transferases0.0004768Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)