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Phenotypic Abnormality (PA): Abnormal thumb morphology

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + + 5:   Abnormality of the skeletal system [HP:0000924] <7>(89|98) (94|51|33)
+ + + + + 5:   Abnormality of skeletal morphology [HP:0011842] <18>(87|89) (90|49|32)
+ + + + 4:   Abnormality of limbs [HP:0040064] <8>(57|64) (59|32|25)
+ + + + 4:   Abnormal appendicular skeleton morphology [HP:0011844] <4>(35|41) (38|23|23)
+ + + + 4:   Abnormality of limb bone [HP:0040068] <1>(28|30) (30|18|20)
+ + + 3:   Abnormality of limb bone morphology [HP:0002813] <13>(28|30) (30|18|20)
+ + + 3:   Abnormality of the upper limb [HP:0002817] <20>(26|29) (30|18|16)
+ + 2:   Abnormal digit morphology [HP:0011297] <10>(16|19) (17|14|16)
+ + 2:   Abnormality of the hand [HP:0001155] <26>(20|25) (24|16|14)
+ 1:   Abnormality of finger [HP:0001167] <24>(11|14) (12|10|10)
0:   Abnormal thumb morphology [HP:0001172] <8>(1|4) (2|5|6)
- 1:   Abnormality of thumb epiphysis [HP:0009599] <13>(0|0) (0|0|0)
- 1:   Abnormality of thumb phalanx [HP:0009602] <11>(0|1) (0|0|0)
- 1:   Deviation of the thumb [HP:0009603] <5>(0|0) (0|0|0)
- 1:   Aplasia/Hypoplasia of the thumb [HP:0009601] <3>(0|0) (0|0|0)
- 1:   Flexion contracture of thumb [HP:0009600] <3>(0|0) (0|0|0)
- 1:   Adducted thumb [HP:0001181](0|1) (0|1|0)
- 1:   Long thumb [HP:0032524](0|0) (0|0|0)
- 1:   Preaxial hand polydactyly [HP:0001177](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Restriction endonuclease-like0.0004356Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
XPF/Rad1/Mus81 nuclease0Direct
TB module/8-cys domain0.0008421Direct
RecA protein-like (ATPase-domain)0.001877Inherited
Integrin A (or I) domain0.0954Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Restriction endonuclease-like0.0002249Direct
TB module/8-cys domain0.0008983Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52980,47781
  • 52980 - Restriction endonuclease-like
  • 47781 - RuvA domain 2-like
  • 0Direct
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0002249Direct
    57581,57196
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 0.0008983Direct
    53300,53300
  • 53300 - vWA-like
  • 53300 - vWA-like
  • 0.0008983Direct
    57196,57581
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0.0008983Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57581
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0Direct
    57196,57581,57196
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 0Direct
    57196,57581,57184
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0002249Direct
    57581,57196,57581
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0.0008983Direct
    57581,57196,57196
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0008983Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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