SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of the cerebellar vermis

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Phenotypic abnormality [HP:0000118] <25>
+ + + + + + + + 8:   Abnormality of the nervous system [HP:0000707] <4>(147|170) (164|102|45)
+ + + + + + + 7:   Abnormality of nervous system morphology [HP:0012639] <5>(70|97) (81|48|16)
+ + + + + + 6:   Morphological abnormality of the central nervous system [HP:0002011] <17>(61|85) (71|41|16)
+ + + + + 5:   Abnormality of brain morphology [HP:0012443] <13>(44|63) (54|31|14)
+ + + + 4:   Abnormality of hindbrain morphology [HP:0011282] <2>(5|6) (7|2|1)
+ + + 3:   Abnormality of the metencephalon [HP:0011283] <3>(5|6) (7|2|1)
+ + 2:   Abnormal cerebellum morphology [HP:0001317] <15>(5|6) (7|2|1)
+ 1:   Cerebellar malformation [HP:0002438] <4>(4|3) (5|1|1)
0:   Abnormality of the cerebellar vermis [HP:0002334] <6>(3|3) (4|1|0)
- 1:   Aplasia/Hypoplasia of the cerebellar vermis [HP:0006817] <4>(3|3) (4|1|0)
- 1:   Cerebellar vermis atrophy [HP:0006855](0|0) (0|0|0)
- 1:   Disorganization of the anterior cerebellar vermis [HP:0007065](0|0) (0|0|0)
- 1:   Dysgenesis of the cerebellar vermis [HP:0002195](0|0) (0|0|0)
- 1:   Dysmorphic inferior cerebellar vermis [HP:0012460](0|0) (0|0|0)
- 1:   Loss of Purkinje cells in the cerebellar vermis [HP:0007001](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Ypt/Rab-GAP domain of gyp1p0.000122Direct
ARID-like0.001174Inherited
WD40 repeat-like0.6838Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ARID domain0.0005808Direct
MIR domain0.001154Inherited
G proteins0.1947Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ypt/Rab-GAP domain of gyp1p0.00005884Direct
ARID-like0.0006458Direct
MIR domain0.001296Inherited
WD40 repeat-like0.6455Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.00005884Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)