SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Basal cell carcinoma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Neoplasm [HP:0002664] <2>(20|24) (24|8|3)
+ + + 3:   Abnormality of the integument [HP:0001574] <4>(46|69) (58|36|15)
+ + 2:   Neoplasm by anatomical site [HP:0011793] <24>(18|21) (21|7|2)
+ + 2:   Abnormality of the skin [HP:0000951] <4>(33|53) (45|35|12)
+ 1:   Neoplasm of the skin [HP:0008069] <29>(4|5) (4|3|1)
0:   Basal cell carcinoma [HP:0002671] <1>(1|2) (1|1|0)
- 1:   Basalioma of the outer ear [HP:0040098](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.000002601Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.000000007395Direct
DNA gyrase/MutL, N-terminal domain0.000000007395Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.000001115Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.000000004993Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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