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Phenotypic Abnormality (PA): Lymphadenopathy

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Abnormality of the cardiovascular system [HP:0001626] <5>(59|81) (72|39|29)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the vasculature [HP:0002597] <13>(33|53) (44|26|18)
+ + + 3:   Abnormality of the immune system [HP:0002715] <3>(37|52) (39|28|15)
+ + 2:   Abnormality of the lymphatic system [HP:0100763] <7>(10|17) (14|6|4)
+ 1:   Abnormality of the lymph nodes [HP:0002733] <6>(4|9) (7|5|2)
0:   Lymphadenopathy [HP:0002716] <5>(3|8) (6|5|2)
- 1:   Cervical lymphadenopathy [HP:0025289](0|0) (0|0|0)
- 1:   Chronic noninfectious lymphadenopathy [HP:0002730](0|0) (0|0|0)
- 1:   Follicular hyperplasia [HP:0002729](0|0) (0|0|0)
- 1:   Generalized lymphadenopathy [HP:0008940](0|0) (0|0|0)
- 1:   Mediastinal lymphadenopathy [HP:0100721](0|0) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DEATH domain0.00000000000001846Direct
Caspase-like0.0001192Direct
RNI-like0.0009677Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
DEATH domain, DD0.00002457Direct
Caspase recruitment domain, CARD0.0003182Direct
Pyrin domain, PYD0.0003182Direct
28-residue LRR0.0006058Direct
STAT DNA-binding domain0.0008015Direct
STAT0.0008015Direct
Transcription factor STAT-4 N-domain0.0008015Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DEATH domain0.000000000000007395Direct
Caspase-like0.00005745Direct
RNI-like0.0005265Direct
Transcription factor STAT-4 N-domain0.0006316Direct
STAT0.0006316Direct
SH3-domain0.8157Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000301Direct
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.0002445Direct
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.0006316Direct
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0006316Direct
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0006316Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0006316Direct
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0006316Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)