SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Arthralgia

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Constitutional symptom [HP:0025142] <12>(8|16) (11|8|3)
+ 1:   Pain [HP:0012531] <35>(5|12) (8|5|0)
0:   Arthralgia [HP:0002829] <1>(2|5) (4|2|0)
- 1:   Arthralgia/arthritis [HP:0005059](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.00000002295Direct
RNI-like0.0005156Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
MHC antigen-recognition domain0.00000001575Direct
C1 set domains (antibody constant domain-like)0.000000246Direct
Pyrin domain, PYD0.0001503Direct
28-residue LRR0.0002442Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MHC antigen-recognition domain0.000000008805Direct
RNI-like0.0002607Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0006268Direct
DEATH domain0.000736Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.000000008805Direct
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001077Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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