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Phenotypic Abnormality (PA): Neoplasm of the liver

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Neoplasm [HP:0002664] <2>(20|24) (24|8|3)
+ + + 3:   Abnormality of the digestive system [HP:0025031] <6>(63|72) (76|45|24)
+ + 2:   Abnormality of the abdominal organs [HP:0002012] <6>(26|24) (29|11|3)
+ + 2:   Neoplasm by anatomical site [HP:0011793] <24>(18|21) (21|7|2)
+ + 2:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(22|26) (28|11|3)
+ 1:   Neoplasm of the gastrointestinal tract [HP:0007378] <16>(6|5) (6|4|0)
+ 1:   Abnormality of the liver [HP:0001392] <4>(16|11) (17|6|0)
0:   Neoplasm of the liver [HP:0002896] <4>(2|2) (2|1|0)
- 1:   Hepatic hemangioma [HP:0031207](0|0) (0|0|0)
- 1:   Hepatoblastoma [HP:0002884](0|0) (0|0|0)
- 1:   Hepatocellular adenoma [HP:0012028](0|0) (0|0|0)
- 1:   Hepatocellular carcinoma [HP:0001402](2|2) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00007444Direct
Ribosomal protein S5 domain 2-like0.01478Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.0000003467Direct
DNA gyrase/MutL, N-terminal domain0.0000003467Direct


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00003523Direct
Ribosomal protein S5 domain 2-like0.009919Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.0000001842Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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