SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Visceromegaly

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|47|25)
+ 1:   Abnormality of abdomen morphology [HP:0001438] <7>(6|10) (8|5|2)
0:   Visceromegaly [HP:0003271] <3>(6|10) (8|5|2)
- 1:   Hepatomegaly [HP:0002240] <1>(1|2) (1|0|0)
- 1:   Splenomegaly [HP:0001744] <1>(4|10) (6|4|2)
- 1:   Hepatosplenomegaly [HP:0001433](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
(Trans)glycosidases0.00005882Direct
Globin-like0.0001829Direct
TNF receptor-like0.0002003Direct
Glycosyl hydrolase domain0.0005877Direct
Notch domain0.004743Inherited
DEATH domain0.3999Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Phoshoinositide 3-kinase (PI3K) helical domain0Direct
Globins0.0001217Direct
Pyrin domain, PYD0.0006777Direct
TNF receptor-like0.002169Inherited
beta-glycanases0.003418Inherited
Notch domain0.003418Inherited
PX domain0.006837Inherited
28-residue LRR0.007376Inherited
DEATH domain, DD0.01046Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
(Trans)glycosidases0.00002649Direct
Globin-like0.000087Direct
TNF receptor-like0.00009594Direct
Glycosyl hydrolase domain0.0002999Direct
Notch domain0.002872Inherited
PX domain0.005705Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.005705Inherited
DEATH domain0.3565Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0Direct
    57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.00005936Direct
    51445,51011
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
  • 0.0002999Direct
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0005309Direct
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.002872Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.002872Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)