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Phenotypic Abnormality (PA): Short stature

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Growth abnormality [HP:0001507] <6>(29|48) (34|24|15)
+ 1:   Abnormality of body height [HP:0000002] <3>(9|13) (9|7|8)
+ 1:   Growth delay [HP:0001510] <5>(10|14) (13|8|3)
0:   Short stature [HP:0004322] <5>(8|11) (8|5|2)
- 1:   Proportionate short stature [HP:0003508] <3>(2|0) (2|0|0)
- 1:   Disproportionate short stature [HP:0003498] <2>(0|0) (0|0|0)
- 1:   Asymmetric short stature [HP:0008929](0|0) (0|0|0)
- 1:   Birth length less than 3rd percentile [HP:0003561](0|0) (0|0|0)
- 1:   Pituitary dwarfism [HP:0000839](1|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal, gelsolin-like domain of Sec23/240Direct
Helical domain of Sec23/240Direct
RuvA domain 2-like0Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0Direct
Zn-finger domain of Sec23/240Direct
Homeodomain-like0.1896Inherited
FnI-like domain0.2015Inherited
"Winged helix" DNA-binding domain0.2725Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-sandwich domain of Sec23/240Direct
XPF/Rad1/Mus81 nuclease0Direct
Histone deacetylase, HDAC0Direct
N-acetyl transferase, NAT0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Exostosin0Direct
Trunk domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
SWIRM domain0Direct
Helical domain of Sec23/240Direct
Homeodomain0.3802Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal, gelsolin-like domain of Sec23/240Direct
Helical domain of Sec23/240Direct
RuvA domain 2-like0Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0Direct
Zn-finger domain of Sec23/240Direct
Homeodomain-like0.1585Inherited
FnI-like domain0.1695Inherited
"Winged helix" DNA-binding domain0.2356Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52980,47781
  • 52980 - Restriction endonuclease-like
  • 47781 - RuvA domain 2-like
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)