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Phenotypic Abnormality (PA): Intestinal polyp

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of digestive system morphology [HP:0025033] <2>(12|18) (17|6|3)
+ + + 3:   Neoplasm [HP:0002664] <2>(20|24) (24|8|3)
+ + + 3:   Abnormality of the digestive system [HP:0025031] <6>(63|72) (76|45|24)
+ + 2:   Neoplasm by anatomical site [HP:0011793] <24>(18|21) (21|7|2)
+ + 2:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(22|26) (28|11|3)
+ + 2:   Morphological abnormality of the gastrointestinal tract [HP:0012718] <8>(12|18) (17|6|3)
+ 1:   Abnormal intestine morphology [HP:0002242] <22>(9|11) (13|3|0)
+ 1:   Neoplasm of the gastrointestinal tract [HP:0007378] <16>(6|5) (6|4|0)
0:   Intestinal polyp [HP:0005266] <4>(4|3) (5|2|0)
- 1:   Intestinal polyposis [HP:0200008] <4>(4|3) (4|2|0)
- 1:   Hamartomatous polyposis [HP:0004390] <3>(0|0) (0|0|0)
- 1:   Inflammatory cap polyp [HP:0025198](0|0) (0|0|0)
- 1:   Small intestinal polyp [HP:0012737](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.00000178Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00000593Direct
Snake toxin-like0.001182Inherited
Ribosomal protein S5 domain 2-like0.00175Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.00000002352Direct
DNA gyrase/MutL, N-terminal domain0.00000002352Direct
DNA repair protein MutS, domain III0.000001297Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.0000007564Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.000002584Direct
Snake toxin-like0.000651Direct
Protein kinase-like (PK-like)0.0009731Direct
Ribosomal protein S5 domain 2-like0.0009887Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.00000001188Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000007564Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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