SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Astrocytoma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Neoplasm [HP:0002664] <2>(20|21) (23|8|3)
+ + + + + + 6:   Phenotypic abnormality [HP:0000118] <25>
+ + + + + 5:   Abnormality of the nervous system [HP:0000707] <4>(142|168) (156|103|45)
+ + + + + 5:   Neoplasm by histology [HP:0011792] <7>(5|7) (6|3|0)
+ + + + + 5:   Neoplasm by anatomical site [HP:0011793] <24>(18|19) (20|7|2)
+ + + + 4:   Nervous tissue neoplasm [HP:0030060] <1>(3|6) (3|2|0)
+ + + + 4:   Abnormality of nervous system morphology [HP:0012639] <5>(69|97) (79|52|16)
+ + + + 4:   Neoplasm of the nervous system [HP:0004375] <2>(3|6) (3|2|0)
+ + + 3:   Morphological abnormality of the central nervous system [HP:0002011] <17>(60|85) (69|44|16)
+ + + 3:   Neoplasm of the central nervous system [HP:0100006] <5>(3|6) (3|2|0)
+ + + 3:   Neuroectodermal neoplasm [HP:0030061] <2>(3|6) (3|2|0)
+ + 2:   Neuroepithelial neoplasm [HP:0030063] <5>(3|6) (3|2|0)
+ + 2:   Abnormality of the glial cells [HP:0100705] <6>(5|5) (5|3|0)
+ + 2:   Malignant neoplasm of the central nervous system [HP:0100836] <5>(3|6) (3|2|0)
+ 1:   Abnormality of the astrocytes [HP:0100707] <1>(1|2) (1|1|0)
+ 1:   Glioma [HP:0009733] <6>(3|4) (3|2|0)
0:   Astrocytoma [HP:0009592] <1>(1|2) (1|1|0)
- 1:   Subependymal giant-cell astrocytoma [HP:0009718](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.00000002578Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.00000002162Direct
ABC transporter ATPase domain-like0.0002887Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.000000009919Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000000009919Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)