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Phenotypic Abnormality (PA): Glioma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Neoplasm [HP:0002664] <2>(20|24) (24|8|3)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the nervous system [HP:0000707] <4>(147|170) (164|102|45)
+ + + + 4:   Neoplasm by histology [HP:0011792] <7>(5|9) (6|3|0)
+ + + + 4:   Neoplasm by anatomical site [HP:0011793] <24>(18|21) (21|7|2)
+ + + 3:   Neoplasm of the nervous system [HP:0004375] <2>(3|6) (3|2|0)
+ + + 3:   Nervous tissue neoplasm [HP:0030060] <1>(3|6) (3|2|0)
+ + + 3:   Abnormality of nervous system morphology [HP:0012639] <5>(70|97) (81|48|16)
+ + 2:   Morphological abnormality of the central nervous system [HP:0002011] <17>(61|85) (71|41|16)
+ + 2:   Neuroectodermal neoplasm [HP:0030061] <2>(3|6) (3|2|0)
+ + 2:   Neoplasm of the central nervous system [HP:0100006] <5>(3|6) (3|2|0)
+ 1:   Malignant neoplasm of the central nervous system [HP:0100836] <5>(3|6) (3|2|0)
+ 1:   Neuroepithelial neoplasm [HP:0030063] <5>(3|6) (3|2|0)
+ 1:   Abnormality of the glial cells [HP:0100705] <6>(5|5) (5|3|0)
0:   Glioma [HP:0009733] <6>(3|4) (3|2|0)
- 1:   Astrocytoma [HP:0009592] <1>(1|2) (1|1|0)
- 1:   Brainstem glioma [HP:0010796](0|0) (0|0|0)
- 1:   Cerebellar glioma [HP:0010795](0|0) (0|0|0)
- 1:   Ependymoma [HP:0002888](0|0) (0|0|0)
- 1:   Glioblastoma multiforme [HP:0012174](2|2) (2|1|0)
- 1:   Optic nerve glioma [HP:0009734](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.0000002807Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.000000614Direct
Ribosomal protein S5 domain 2-like0.0000124Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.000000002697Direct
DNA gyrase/MutL, N-terminal domain0.000000002697Direct
DNA repair protein MutS, domain III0.0000002384Direct
ABC transporter ATPase domain-like0.002148Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.0000001155Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0000002554Direct
Ribosomal protein S5 domain 2-like0.000005521Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.000000001099Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000001155Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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