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Phenotypic Abnormality (PA): Stomatitis

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Abnormality of head or neck [HP:0000152] <2>(87|107) (98|59|37)
+ + + + + + 6:   Abnormality of the head [HP:0000234] <6>(86|105) (97|58|37)
+ + + + + 5:   Abnormality of the face [HP:0000271] <14>(72|88) (83|47|30)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the immune system [HP:0002715] <3>(37|52) (39|28|15)
+ + + + 4:   Abnormality of the mouth [HP:0000153] <2>(38|55) (44|30|22)
+ + + 3:   Abnormality of immune system physiology [HP:0010978] <14>(29|40) (31|23|11)
+ + + 3:   Abnormal oral morphology [HP:0031816] <6>(36|50) (42|28|21)
+ + 2:   Abnormal oral cavity morphology [HP:0000163] <14>(29|42) (35|21|15)
+ + 2:   Abnormal inflammatory response [HP:0012647] <2>(17|22) (18|11|3)
+ 1:   Increased inflammatory response [HP:0012649] <27>(15|20) (16|9|3)
+ 1:   Abnormal oral mucosa morphology [HP:0011830] <15>(11|16) (13|8|3)
0:   Stomatitis [HP:0010280] <1>(6|7) (6|5|2)
- 1:   Recurrent aphthous stomatitis [HP:0011107](4|4) (4|2|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RNI-like0.000121Direct
Transcription factor STAT-4 N-domain0.000676Direct
STAT0.000676Direct
4-helical cytokines0.005281Inherited
DEATH domain0.01378Inherited
MHC antigen-recognition domain0.01539Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
28-residue LRR0.0001951Direct
STAT DNA-binding domain0.0004097Direct
STAT0.0004097Direct
Pyrin domain, PYD0.0004097Direct
Transcription factor STAT-4 N-domain0.0004097Direct
MHC antigen-recognition domain0.01125Inherited
C1 set domains (antibody constant domain-like)0.03164Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RNI-like0.00005836Direct
Transcription factor STAT-4 N-domain0.0003565Direct
STAT0.0003565Direct
4-helical cytokines0.003276Inherited
DEATH domain0.009202Inherited
MHC antigen-recognition domain0.01035Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.0003565Direct
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0003565Direct
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0003565Direct
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0003565Direct
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.01035Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0003565Direct
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0003565Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)