SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Spinal dysraphism

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the nervous system [HP:0000707] <4>(147|170) (164|102|45)
+ + + 3:   Abnormality of nervous system morphology [HP:0012639] <5>(70|97) (81|48|16)
+ + 2:   Abnormal neural tube morphology [HP:0410043] <1>(3|5) (3|0|0)
+ + 2:   Morphological abnormality of the central nervous system [HP:0002011] <17>(61|85) (71|41|16)
+ 1:   Abnormality of the spinal cord [HP:0002143] <16>(3|5) (3|0|2)
+ 1:   Neural tube defect [HP:0045005] <3>(3|5) (3|0|0)
0:   Spinal dysraphism [HP:0010301] <1>(3|5) (3|0|0)
- 1:   Spina bifida [HP:0002414] <3>(2|4) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RuvA domain 2-like0.00004363Direct
ARID-like0.000463Direct
Bromodomain0.0025Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Ras-binding domain, RBD0.0002915Direct
ARID domain0.0002915Direct
Bromodomain0.001734Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.006402Inherited
VWC domain0.1879Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RuvA domain 2-like0.00002029Direct
ARID-like0.00024Direct
Bromodomain0.001454Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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