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Phenotypic Abnormality (PA): Abnormality of the upper urinary tract

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the genitourinary system [HP:0000119] <5>(74|72) (79|29|9)
+ 1:   Abnormality of the urinary system [HP:0000079] <4>(38|40) (44|16|7)
0:   Abnormality of the upper urinary tract [HP:0010935] <2>(20|21) (22|8|3)
- 1:   Abnormality of the kidney [HP:0000077] <3>(16|16) (18|7|3)
- 1:   Abnormality of the ureter [HP:0000069] <3>(4|5) (4|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tricorn protease domain 20Direct
PRTase-like0Direct
WD40 repeat-like0.0185Inherited
Ypt/Rab-GAP domain of gyp1p0.02739Inherited
4Fe-4S ferredoxins0.02739Inherited
C-type lectin-like0.05126Inherited
SET domain0.0596Inherited
Acyl-CoA N-acyltransferases (Nat)0.0697Inherited
Cysteine-rich domain0.1002Inherited
FYVE/PHD zinc finger0.1347Inherited
Complement control module/SCR domain0.1608Inherited
Homeodomain-like0.2259Inherited
GroEL equatorial domain-like0.3782Inherited
ARID-like0.3782Inherited
Cytokine0.4268Inherited
TNF-like0.4826Inherited
Actin-like ATPase domain0.5009Inherited
TPR-like0.5187Inherited
MHC antigen-recognition domain0.5441Inherited
L domain-like0.6958Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DIX domain0Direct
Phosphoribosyltransferases (PRTases)0Direct
Cystathionine synthase-like0Direct
PHD domain0.01709Inherited
Histone lysine methyltransferases0.01894Inherited
Noncollagenous (NC1) domain of collagen IV0.02299Inherited
HMG-box0.06991Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.07787Inherited
Complement control module/SCR domain0.1401Inherited
WD40-repeat0.2216Inherited
Actin/HSP700.2624Inherited
RecA protein-like (ATPase-domain)0.2624Inherited
Cytoplasmic domain of inward rectifier potassium channel0.2624Inherited
Fibroblast growth factors (FGF)0.2624Inherited
Homeodomain0.3362Inherited
ARID domain0.3427Inherited
C1 set domains (antibody constant domain-like)0.4245Inherited
TNF-like0.4528Inherited
MHC antigen-recognition domain0.5093Inherited
Ngr ectodomain-like0.6524Inherited
Voltage-gated potassium channels0.8262Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tricorn protease domain 20Direct
PRTase-like0Direct
WD40 repeat-like0.0126Inherited
Ypt/Rab-GAP domain of gyp1p0.0192Inherited
4Fe-4S ferredoxins0.0192Inherited
C-type lectin-like0.03823Inherited
SET domain0.04512Inherited
Acyl-CoA N-acyltransferases (Nat)0.05337Inherited
HMG-box0.06698Inherited
Cysteine-rich domain0.07937Inherited
FYVE/PHD zinc finger0.1094Inherited
Complement control module/SCR domain0.1325Inherited
E set domains0.1437Inherited
Homeodomain-like0.1915Inherited
GroEL equatorial domain-like0.3366Inherited
ARID-like0.3366Inherited
Cytokine0.3839Inherited
TNF-like0.4391Inherited
Actin-like ATPase domain0.4575Inherited
TPR-like0.4754Inherited
MHC antigen-recognition domain0.5013Inherited
L domain-like0.6577Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.008429Inherited
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.0192Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.02189Inherited
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.06245Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.0796Inherited
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.2576Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.5013Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.5319Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57535,57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.01781Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.03133Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1668Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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