SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abdominal symptom

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the digestive system [HP:0025031] <6>(63|72) (76|45|24)
+ 1:   Abnormality of digestive system physiology [HP:0025032] <5>(26|31) (35|16|2)
0:   Abdominal symptom [HP:0011458] <12>(15|19) (19|11|2)
- 1:   Abdominal pain [HP:0002027] <6>(2|5) (2|3|0)
- 1:   Diarrhea [HP:0002014] <6>(2|2) (2|1|0)
- 1:   Abnormal bowel sounds [HP:0030142] <3>(0|0) (0|0|0)
- 1:   Feeding difficulties [HP:0011968] <3>(2|3) (3|1|0)
- 1:   Constipation [HP:0002019] <2>(1|2) (1|2|0)
- 1:   Nausea and vomiting [HP:0002017] <2>(5|9) (6|3|0)
- 1:   Abdominal distention [HP:0003270] <1>(2|1) (2|0|0)
- 1:   Anorexia [HP:0002039](0|0) (2|3|2)
- 1:   Malnutrition [HP:0004395](0|0) (0|0|0)
- 1:   Poor appetite [HP:0004396](0|0) (0|0|0)
- 1:   Protein avoidance [HP:0002038](0|0) (0|0|0)
- 1:   Scaphoid abdomen [HP:0025063](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ADC-like0Direct
Ribonuclease PH domain 2-like0Direct
Tricorn protease domain 20Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0Direct
SAND domain-like0Direct
Adenine nucleotide alpha hydrolases-like0.00428Inherited
MHC antigen-recognition domain0.0379Inherited
4Fe-4S ferredoxins0.05204Inherited
Integrin domains0.1149Inherited
SpoIIaa-like0.2094Inherited
DEATH domain0.2663Inherited
Complement control module/SCR domain0.5286Inherited
Homeodomain-like0.5452Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.6826Inherited
Acyl-CoA dehydrogenase NM domain-like0.6826Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
P4 origin-binding domain-like0Direct
Ribonuclease PH domain 1-like0Direct
Ribonuclease PH domain 2-like0Direct
Serum paraoxonase/arylesterase 1, PON10Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0Direct
C1 set domains (antibody constant domain-like)0.01597Inherited
DNA gyrase/MutL, second domain0.01771Inherited
DNA gyrase/MutL, N-terminal domain0.01771Inherited
MHC antigen-recognition domain0.02987Inherited
Nitrogenase iron protein-like0.05295Inherited
Integrin domains0.09734Inherited
Pyrin domain, PYD0.1051Inherited
Anti-sigma factor antagonist SpoIIaa0.1051Inherited
BC ATP-binding domain-like0.1846Inherited
BC N-terminal domain-like0.1846Inherited
Histone lysine methyltransferases0.3138Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.3628Inherited
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.3628Inherited
Complement control module/SCR domain0.4906Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SAND domain-like0Direct
ADC-like0Direct
Tricorn protease domain 20Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0Direct
Ribonuclease PH domain 2-like0Direct
Adenine nucleotide alpha hydrolases-like0.002607Inherited
Transcription factor STAT-4 N-domain0.006761Inherited
STAT0.006761Inherited
MHC antigen-recognition domain0.02744Inherited
Calcium-dependent phosphotriesterase0.03883Inherited
4Fe-4S ferredoxins0.03883Inherited
Integrin domains0.09168Inherited
SpoIIaa-like0.1765Inherited
DEATH domain0.2298Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.4598Inherited
Complement control module/SCR domain0.4854Inherited
Homeodomain-like0.5024Inherited
Acyl-CoA dehydrogenase NM domain-like0.6443Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.6443Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54211,55666
  • 54211 - Ribosomal protein S5 domain 2-like
  • 55666 - Ribonuclease PH domain 2-like
  • 0Direct
    51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
  • 0Direct
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.006761Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.006761Inherited
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.006761Inherited
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.01664Inherited
    55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.01664Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.02744Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.197Inherited
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.5351Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.6443Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.006761Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.006761Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)