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Phenotypic Abnormality (PA): Abnormal renal morphology

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the genitourinary system [HP:0000119] <5>(74|72) (79|29|9)
+ + + 3:   Abnormality of the urinary system [HP:0000079] <4>(38|40) (44|16|7)
+ + 2:   Abnormality of the upper urinary tract [HP:0010935] <2>(20|21) (22|8|3)
+ 1:   Abnormality of the kidney [HP:0000077] <3>(16|16) (18|7|3)
0:   Abnormal renal morphology [HP:0012210] <26>(14|11) (15|5|1)
- 1:   Renal cyst [HP:0000107] <9>(1|0) (1|0|0)
- 1:   Abnormal renal cortex morphology [HP:0011035] <6>(4|5) (4|2|0)
- 1:   Abnormal renal medulla morphology [HP:0100957] <5>(2|1) (2|1|0)
- 1:   Nephrolithiasis [HP:0000787] <4>(1|0) (1|0|0)
- 1:   Abnormal localization of kidney [HP:0100542] <3>(1|1) (1|0|0)
- 1:   Abnormal nephron morphology [HP:0012575] <3>(4|5) (4|2|0)
- 1:   Abnormal renal artery morphology [HP:0008776] <3>(0|0) (0|0|0)
- 1:   Abnormal renal calyx morphology [HP:0011130] <3>(0|0) (0|0|0)
- 1:   Abnormal renal pelvis morphology [HP:0010944] <3>(3|2) (4|2|0)
- 1:   Nephrocalcinosis [HP:0000121] <3>(0|0) (0|0|0)
- 1:   Renal atrophy [HP:0012585] <3>(0|0) (0|0|0)
- 1:   Abnormal renal collecting system morphology [HP:0004742] <2>(0|0) (0|0|0)
- 1:   Nephrogenic rest [HP:0100880] <2>(0|0) (0|0|0)
- 1:   Renal duplication [HP:0000075] <2>(1|1) (1|0|0)
- 1:   Renal dysplasia [HP:0000110] <2>(0|0) (0|0|0)
- 1:   Renal hypoplasia/aplasia [HP:0008678] <2>(1|1) (1|0|1)
- 1:   Renal fibrosis [HP:0030760] <1>(0|0) (0|0|0)
- 1:   Renal malrotation [HP:0004712] <1>(0|0) (0|0|0)
- 1:   Decreased renal parenchymal thickness [HP:0025327](0|0) (0|0|0)
- 1:   Enlarged kidney [HP:0000105](0|0) (0|0|0)
- 1:   Hyperechogenic kidneys [HP:0004719](0|0) (0|0|0)
- 1:   Nephrosclerosis [HP:0009741](0|0) (0|0|0)
- 1:   Perinephric fluid collection [HP:0031226](0|0) (0|0|0)
- 1:   Perirenal hematoma [HP:0030171](0|0) (0|0|0)
- 1:   Renal amyloidosis [HP:0001917](0|0) (0|0|0)
- 1:   Renal steatosis [HP:0000799](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tricorn protease domain 20Direct
Ypt/Rab-GAP domain of gyp1p0.01135Inherited
Cysteine-rich domain0.0286Inherited
GroEL equatorial domain-like0.03204Inherited
Acyl-CoA N-acyltransferases (Nat)0.03204Inherited
ARID-like0.06019Inherited
MHC antigen-recognition domain0.1225Inherited
TPR-like0.1896Inherited
Cytokine0.2303Inherited
WD40 repeat-like0.2303Inherited
TNF-like0.2696Inherited
C-type lectin-like0.4307Inherited
PRTase-like0.4977Inherited
L domain-like0.5847Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cystathionine synthase-like0Direct
Noncollagenous (NC1) domain of collagen IV0.007179Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.02116Inherited
ARID domain0.04651Inherited
MHC antigen-recognition domain0.09922Inherited
Fibroblast growth factors (FGF)0.09922Inherited
HMG-box0.1645Inherited
TNF-like0.235Inherited
C1 set domains (antibody constant domain-like)0.3651Inherited
Ngr ectodomain-like0.545Inherited
WD40-repeat0.6796Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tricorn protease domain 20Direct
Ypt/Rab-GAP domain of gyp1p0.007456Inherited
Cysteine-rich domain0.02013Inherited
GroEL equatorial domain-like0.02287Inherited
Acyl-CoA N-acyltransferases (Nat)0.02287Inherited
ARID-like0.04561Inherited
MHC antigen-recognition domain0.09837Inherited
TPR-like0.1585Inherited
HMG-box0.1734Inherited
WD40 repeat-like0.1957Inherited
Cytokine0.1957Inherited
TNF-like0.2329Inherited
C-type lectin-like0.3877Inherited
PRTase-like0.4543Inherited
L domain-like0.5425Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.007087Inherited
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.007456Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.03033Inherited
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.09837Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.3083Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.3739Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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