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Phenotypic Abnormality (PA): Pain

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Constitutional symptom [HP:0025142] <12>(8|15) (10|7|3)
0:   Pain [HP:0012531] <35>(5|11) (7|4|0)
- 1:   Abdominal pain [HP:0002027] <6>(2|5) (2|3|0)
- 1:   Episodic pain [HP:0032148] <3>(0|0) (0|0|0)
- 1:   Back pain [HP:0003418] <2>(0|0) (0|0|0)
- 1:   Limb pain [HP:0009763] <2>(0|0) (0|0|0)
- 1:   Myalgia [HP:0003326] <2>(3|5) (4|2|0)
- 1:   Anal pain [HP:0500005] <1>(0|0) (0|0|0)
- 1:   Arthralgia [HP:0002829] <1>(2|5) (4|2|0)
- 1:   Chest pain [HP:0100749] <1>(1|2) (1|1|0)
- 1:   Knee pain [HP:0030839] <1>(0|0) (0|0|0)
- 1:   Ocular pain [HP:0200026] <1>(0|0) (0|0|0)
- 1:   Allodynia [HP:0012533](0|0) (0|0|0)
- 1:   Ankle pain [HP:0030840](0|0) (0|0|0)
- 1:   Bladder pain [HP:0032171](0|0) (0|0|0)
- 1:   Bone pain [HP:0002653](0|0) (0|0|0)
- 1:   Chronic pain [HP:0012532](0|0) (0|0|0)
- 1:   Costochondral pain [HP:0006649](0|0) (0|0|0)
- 1:   Ear pain [HP:0030766](0|0) (0|0|0)
- 1:   Elbow pain [HP:0030835](0|0) (0|0|0)
- 1:   Epigastric pain [HP:0410019](0|0) (0|0|0)
- 1:   Erythromelalgia [HP:0032147](0|0) (0|0|0)
- 1:   Finger pain [HP:0030837](0|0) (0|0|0)
- 1:   Flank pain [HP:0030157](0|0) (0|0|0)
- 1:   Foot pain [HP:0025238](0|0) (0|0|0)
- 1:   Groin pain [HP:0031520](0|0) (0|0|0)
- 1:   Hip pain [HP:0030838](0|0) (0|0|0)
- 1:   Jaw pain [HP:0040264](0|0) (0|0|0)
- 1:   Mandibular pain [HP:0200025](0|0) (0|0|0)
- 1:   Neck pain [HP:0030833](0|0) (0|0|0)
- 1:   Scrotal pain [HP:0030155](0|0) (0|0|0)
- 1:   Shoulder pain [HP:0030834](0|0) (0|0|0)
- 1:   Tendon pain [HP:0032510](0|0) (0|0|0)
- 1:   Toe pain [HP:0030841](0|0) (0|0|0)
- 1:   Tongue pain [HP:0030811](0|0) (0|0|0)
- 1:   Vulvodynia [HP:0030943](0|0) (0|0|0)
- 1:   Wrist pain [HP:0030836](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.0003823Direct
DEATH domain0.01973Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.0584Inherited
Acyl-CoA dehydrogenase NM domain-like0.0584Inherited
RNI-like0.07471Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Serum paraoxonase/arylesterase 1, PON10Direct
MHC antigen-recognition domain0.0002783Direct
DNA gyrase/MutL, second domain0.0007113Direct
DNA gyrase/MutL, N-terminal domain0.0007113Direct
Adenosine/AMP deaminase0.01168Inherited
Pyrin domain, PYD0.01168Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.02343Inherited
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.02343Inherited
28-residue LRR0.03574Inherited
C1 set domains (antibody constant domain-like)0.2853Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MHC antigen-recognition domain0.0001965Direct
DEATH domain0.01352Inherited
Metallo-dependent hydrolases0.03711Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.03711Inherited
Acyl-CoA dehydrogenase NM domain-like0.04408Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.04408Inherited
RNI-like0.05761Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.0001965Direct
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0005717Direct
    55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.0005717Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.04408Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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