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Phenotypic Abnormality (PA): Abnormal urine cytology

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Abnormality of the genitourinary system [HP:0000119] <5>(74|72) (79|29|9)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the urinary system [HP:0000079] <4>(38|40) (44|16|7)
+ + 2:   Abnormality of the urinary system physiology [HP:0011277] <3>(22|25) (26|9|5)
+ + 2:   Abnormality of metabolism/homeostasis [HP:0001939] <16>(76|83) (79|38|16)
+ 1:   Abnormality of urine homeostasis [HP:0003110] <58>(17|20) (20|7|3)
0:   Abnormal urine cytology [HP:0012614] <5>(5|7) (5|5|3)
- 1:   Cylindruria [HP:0012615] <3>(0|0) (0|0|0)
- 1:   Increased urinary epithelial cell count [HP:0032211] <3>(0|0) (0|0|0)
- 1:   Hematuria [HP:0000790] <2>(1|3) (1|1|0)
- 1:   Pyuria [HP:0012085] <2>(0|0) (0|0|0)
- 1:   Urinary mulberry cells [HP:0032568](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-type lectin-like0.00004919Direct
Transcription factor STAT-4 N-domain0.0003299Direct
STAT0.0003299Direct
Complement control module/SCR domain0.0007317Direct
L domain-like0.05882Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Phosphoribosyltransferases (PRTases)0Direct
Noncollagenous (NC1) domain of collagen IV0.000005379Direct
STAT DNA-binding domain0.0002733Direct
STAT0.0002733Direct
Transcription factor STAT-4 N-domain0.0002733Direct
Complement control module/SCR domain0.0007202Direct
Ngr ectodomain-like0.007276Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-type lectin-like0.00002298Direct
Transcription factor STAT-4 N-domain0.0001681Direct
STAT0.0001681Direct
Complement control module/SCR domain0.0003889Direct
L domain-like0.04447Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.00002218Direct
    57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.0001578Direct
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.0001681Direct
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0001681Direct
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0001681Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57535,57535,57535
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 57535 - Complement control module/SCR domain
  • 0.00008693Direct
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.0001681Direct
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.0001681Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)