SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Abnormality of muscle size

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the musculature [HP:0003011] <3>(62|74) (69|31|7)
+ 1:   Abnormal skeletal muscle morphology [HP:0011805] <38>(30|34) (32|13|3)
0:   Abnormality of muscle size [HP:0030236] <3>(6|6) (6|3|0)
- 1:   Skeletal muscle atrophy [HP:0003202] <12>(3|3) (3|2|0)
- 1:   Skeletal muscle hypertrophy [HP:0003712] <9>(1|1) (1|0|0)
- 1:   Aplasia/Hypoplasia involving the skeletal musculature [HP:0001460] <3>(2|2) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
MIR domain0.04544Inherited
GroEL equatorial domain-like0.05062Inherited
vWA-like0.102Inherited
Nicotinic receptor ligand binding domain-like0.1442Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.1442Inherited
Actin-like ATPase domain0.736Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Serum paraoxonase/arylesterase 1, PON10Direct
FHA domain0.009858Inherited
MIR domain0.03363Inherited
Integrin A (or I) domain0.1225Inherited
Nicotinic receptor ligand binding domain-like0.1225Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.1225Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MIR domain0.03339Inherited
GroEL equatorial domain-like0.03776Inherited
vWA-like0.08053Inherited
Nicotinic receptor ligand binding domain-like0.1179Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.1179Inherited
Actin-like ATPase domain0.6991Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00001243Direct
    53300,53300
  • 53300 - vWA-like
  • 53300 - vWA-like
  • 0.009057Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.1179Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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